Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 YBX1P4-201ENST00000392794 808 ntBASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KRTCAP3Q53RY4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.16■■□□□ 1.14
KRTCAP3Q53RY4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRTCAP3Q53RY4 AL451085.2-201ENST00000605085 799 ntBASIC22.15■■□□□ 1.14
KRTCAP3Q53RY4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRTCAP3Q53RY4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
KRTCAP3Q53RY4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
KRTCAP3Q53RY4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
KRTCAP3Q53RY4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRTCAP3Q53RY4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRTCAP3Q53RY4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRTCAP3Q53RY4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
KRTCAP3Q53RY4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.14■■□□□ 1.13
KRTCAP3Q53RY4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KRTCAP3Q53RY4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRTCAP3Q53RY4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
KRTCAP3Q53RY4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.13■■□□□ 1.13
KRTCAP3Q53RY4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.13■■□□□ 1.13
KRTCAP3Q53RY4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 ABCB10P1-201ENST00000614297 2181 ntBASIC22.12■■□□□ 1.13
KRTCAP3Q53RY4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 KRT8P33-201ENST00000508125 1423 ntBASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KRTCAP3Q53RY4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
KRTCAP3Q53RY4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.1■■□□□ 1.13
KRTCAP3Q53RY4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
KRTCAP3Q53RY4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
KRTCAP3Q53RY4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
KRTCAP3Q53RY4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRTCAP3Q53RY4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.08■■□□□ 1.13
KRTCAP3Q53RY4 MIR4508-201ENST00000584178 70 ntBASIC22.08■■□□□ 1.13
KRTCAP3Q53RY4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
KRTCAP3Q53RY4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.08■■□□□ 1.12
KRTCAP3Q53RY4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 AC103834.1-201ENST00000520383 144 ntBASIC22.07■■□□□ 1.12
KRTCAP3Q53RY4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.06■■□□□ 1.12
KRTCAP3Q53RY4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 PVT1_1.1-201ENST00000615125 194 ntBASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
KRTCAP3Q53RY4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
KRTCAP3Q53RY4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRTCAP3Q53RY4 AC019171.1-201ENST00000601251 1056 ntBASIC22.04■■□□□ 1.12
KRTCAP3Q53RY4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KRTCAP3Q53RY4 AC009299.2-201ENST00000482477 511 ntBASIC22.03■■□□□ 1.12
KRTCAP3Q53RY4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRTCAP3Q53RY4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.02■■□□□ 1.12
KRTCAP3Q53RY4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRTCAP3Q53RY4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
KRTCAP3Q53RY4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRTCAP3Q53RY4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
KRTCAP3Q53RY4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.01■■□□□ 1.11
KRTCAP3Q53RY4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRTCAP3Q53RY4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRTCAP3Q53RY4 KRT18P10-201ENST00000388836 1287 ntBASIC22■■□□□ 1.11
KRTCAP3Q53RY4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
KRTCAP3Q53RY4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22■■□□□ 1.11
KRTCAP3Q53RY4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRTCAP3Q53RY4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.99■■□□□ 1.11
KRTCAP3Q53RY4 AC087393.1-201ENST00000582896 145 ntBASIC21.99■■□□□ 1.11
KRTCAP3Q53RY4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms