Protein–RNA interactions for Protein: P78346

RPP30, Ribonuclease P protein subunit p30, humanhuman

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30P78346 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RPP30P78346 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPP30P78346 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPP30P78346 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.68■□□□□ 0.74
RPP30P78346 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RPP30P78346 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPP30P78346 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPP30P78346 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.67■□□□□ 0.74
RPP30P78346 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPP30P78346 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
RPP30P78346 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPP30P78346 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.66■□□□□ 0.74
RPP30P78346 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPP30P78346 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPP30P78346 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.66■□□□□ 0.74
RPP30P78346 WHAMMP3-201ENST00000611636 1609 ntBASIC19.65■□□□□ 0.74
RPP30P78346 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RPP30P78346 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPP30P78346 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPP30P78346 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPP30P78346 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPP30P78346 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPP30P78346 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPP30P78346 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPP30P78346 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RPP30P78346 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPP30P78346 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPP30P78346 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPP30P78346 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.63■□□□□ 0.73
RPP30P78346 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPP30P78346 AC110285.7-201ENST00000624417 1536 ntBASIC19.62■□□□□ 0.73
RPP30P78346 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.62■□□□□ 0.73
RPP30P78346 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.62■□□□□ 0.73
RPP30P78346 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.61■□□□□ 0.73
RPP30P78346 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RPP30P78346 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPP30P78346 MIR3665-201ENST00000578708 105 ntBASIC19.61■□□□□ 0.73
RPP30P78346 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPP30P78346 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPP30P78346 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPP30P78346 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.61■□□□□ 0.73
RPP30P78346 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPP30P78346 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPP30P78346 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPP30P78346 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.6■□□□□ 0.73
RPP30P78346 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPP30P78346 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPP30P78346 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPP30P78346 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPP30P78346 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPP30P78346 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.59■□□□□ 0.73
RPP30P78346 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPP30P78346 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPP30P78346 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RPP30P78346 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPP30P78346 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RPP30P78346 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPP30P78346 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPP30P78346 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPP30P78346 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPP30P78346 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPP30P78346 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
RPP30P78346 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.57■□□□□ 0.72
RPP30P78346 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.57■□□□□ 0.72
RPP30P78346 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
RPP30P78346 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPP30P78346 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPP30P78346 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.56■□□□□ 0.72
RPP30P78346 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RPP30P78346 DUX4L28-201ENST00000623687 678 ntBASIC19.56■□□□□ 0.72
RPP30P78346 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RPP30P78346 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPP30P78346 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPP30P78346 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPP30P78346 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPP30P78346 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPP30P78346 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPP30P78346 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.55■□□□□ 0.72
RPP30P78346 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.55■□□□□ 0.72
RPP30P78346 AC093323.1-202ENST00000635031 2045 ntBASIC19.54■□□□□ 0.72
RPP30P78346 AC010501.1-201ENST00000606270 1962 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 1080 ms