Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.31
RAB40ALP0C0E4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB40ALP0C0E4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAB40ALP0C0E4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB40ALP0C0E4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB40ALP0C0E4 DUX4L9-201ENST00000449051 1259 ntBASIC23.18■■□□□ 1.3
RAB40ALP0C0E4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB40ALP0C0E4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RAB40ALP0C0E4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RAB40ALP0C0E4 AL359504.2-201ENST00000605506 1601 ntBASIC23.17■■□□□ 1.3
RAB40ALP0C0E4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB40ALP0C0E4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB40ALP0C0E4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 RARRES2P1-201ENST00000474487 481 ntBASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RAB40ALP0C0E4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.15■■□□□ 1.3
RAB40ALP0C0E4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB40ALP0C0E4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RAB40ALP0C0E4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 AC074183.2-201ENST00000623112 922 ntBASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAB40ALP0C0E4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 SPCS2P3-201ENST00000500401 656 ntBASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 MIR6765-201ENST00000614092 87 ntBASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RAB40ALP0C0E4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAB40ALP0C0E4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RAB40ALP0C0E4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.11■■□□□ 1.29
RAB40ALP0C0E4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RAB40ALP0C0E4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RAB40ALP0C0E4 AC018755.3-202ENST00000596210 929 ntBASIC23.1■■□□□ 1.29
RAB40ALP0C0E4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RAB40ALP0C0E4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 AC142086.6-201ENST00000621154 1765 ntBASIC23.09■■□□□ 1.29
RAB40ALP0C0E4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAB40ALP0C0E4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RAB40ALP0C0E4 BHLHE23-202ENST00000612929 1109 ntBASIC23.08■■□□□ 1.29
RAB40ALP0C0E4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RAB40ALP0C0E4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAB40ALP0C0E4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
RAB40ALP0C0E4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RAB40ALP0C0E4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.06■■□□□ 1.28
RAB40ALP0C0E4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAB40ALP0C0E4 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.06■■□□□ 1.28
RAB40ALP0C0E4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RAB40ALP0C0E4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAB40ALP0C0E4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.05■■□□□ 1.28
RAB40ALP0C0E4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RAB40ALP0C0E4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAB40ALP0C0E4 AC139795.1-202ENST00000500444 432 ntBASIC23.04■■□□□ 1.28
RAB40ALP0C0E4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAB40ALP0C0E4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAB40ALP0C0E4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAB40ALP0C0E4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RAB40ALP0C0E4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
RAB40ALP0C0E4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.03■■□□□ 1.28
RAB40ALP0C0E4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAB40ALP0C0E4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms