Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TRBV6-6A0A0A6YYG2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-6A0A0A6YYG2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.4■□□□□ 0.86
TRBV6-6A0A0A6YYG2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-6A0A0A6YYG2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-6A0A0A6YYG2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-6A0A0A6YYG2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-6A0A0A6YYG2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-6A0A0A6YYG2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.39■□□□□ 0.85
TRBV6-6A0A0A6YYG2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 AC135731.1-201ENST00000569415 2548 ntBASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV6-6A0A0A6YYG2 MIR219A2-201ENST00000608502 1504 ntBASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 RPS2P35-201ENST00000443417 897 ntBASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV6-6A0A0A6YYG2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 DUX4L11-201ENST00000611504 1267 ntBASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 DUX4L12-201ENST00000614593 1267 ntBASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 DUX4L14-201ENST00000621227 1267 ntBASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV6-6A0A0A6YYG2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.35■□□□□ 0.85
TRBV6-6A0A0A6YYG2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.35■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV6-6A0A0A6YYG2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV6-6A0A0A6YYG2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV6-6A0A0A6YYG2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV6-6A0A0A6YYG2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV6-6A0A0A6YYG2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 ERN1-208ENST00000606895 2068 ntBASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBV6-6A0A0A6YYG2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV6-6A0A0A6YYG2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.31■□□□□ 0.84
TRBV6-6A0A0A6YYG2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV6-6A0A0A6YYG2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.29■□□□□ 0.84
TRBV6-6A0A0A6YYG2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-6A0A0A6YYG2 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.28■□□□□ 0.84
TRBV6-6A0A0A6YYG2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV6-6A0A0A6YYG2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-6A0A0A6YYG2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV6-6A0A0A6YYG2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-6A0A0A6YYG2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-6A0A0A6YYG2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.27■□□□□ 0.84
TRBV6-6A0A0A6YYG2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms