Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 FLNB-210ENST00000481470 6497 ntTSL 1 (best)11.23□□□□□ -0.619e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.738e-8■□□□□ 8.8
SND1Q7KZF4 HSBP1-202ENST00000567382 889 ntTSL 225.37■■□□□ 1.658e-8■□□□□ 8.8
SND1Q7KZF4 KCNN4-204ENST00000599107 687 ntTSL 220.4■□□□□ 0.868e-8■□□□□ 8.8
SND1Q7KZF4 LTBP4-225ENST00000599225 281 ntTSL 316.61■□□□□ 0.258e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.158e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-203ENST00000524628 612 ntTSL 215.92■□□□□ 0.148e-8■□□□□ 8.8
SND1Q7KZF4 LTBP4-220ENST00000598166 699 ntTSL 515.85■□□□□ 0.138e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.038e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.238e-8■□□□□ 8.8
SND1Q7KZF4 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.378e-8■□□□□ 8.8
SND1Q7KZF4 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.468e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-206ENST00000528648 362 ntTSL 39.23□□□□□ -0.938e-8■□□□□ 8.8
SND1Q7KZF4 BANF1-204ENST00000524663 251 ntTSL 39.15□□□□□ -0.948e-8■□□□□ 8.8
SND1Q7KZF4 HSBP1-203ENST00000569301 551 ntTSL 27.05□□□□□ -1.288e-8■□□□□ 8.8
SND1Q7KZF4 PSMA5-203ENST00000484563 1503 ntTSL 217.01■□□□□ 0.315e-7■□□□□ 8.8
SND1Q7KZF4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.95■■□□□ 1.593e-7■□□□□ 8.7
SND1Q7KZF4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.993e-7■□□□□ 8.7
SND1Q7KZF4 BCAM-210ENST00000591520 878 ntTSL 320.64■□□□□ 0.891e-10■□□□□ 8.7
SND1Q7KZF4 INSIG2-203ENST00000467223 627 ntTSL 519.86■□□□□ 0.773e-6■□□□□ 8.7
SND1Q7KZF4 BCAM-203ENST00000588603 904 ntTSL 218.61■□□□□ 0.571e-10■□□□□ 8.7
SND1Q7KZF4 INSIG2-202ENST00000411929 574 ntTSL 216.16■□□□□ 0.183e-6■□□□□ 8.7
SND1Q7KZF4 INSIG2-206ENST00000485520 3185 ntTSL 511.24□□□□□ -0.613e-6■□□□□ 8.7
SND1Q7KZF4 INSIG2-204ENST00000471186 2100 ntTSL 510.02□□□□□ -0.813e-6■□□□□ 8.7
SND1Q7KZF4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC9.56□□□□□ -0.883e-6■□□□□ 8.7
SND1Q7KZF4 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.053e-6■□□□□ 8.7
SND1Q7KZF4 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.3□□□□□ -1.083e-7■□□□□ 8.7
SND1Q7KZF4 UNC50-206ENST00000466492 482 ntTSL 28.09□□□□□ -1.113e-7■□□□□ 8.7
SND1Q7KZF4 UNC50-202ENST00000393493 613 ntTSL 26.49□□□□□ -1.373e-7■□□□□ 8.7
SND1Q7KZF4 UNC50-205ENST00000423713 489 ntTSL 26.47□□□□□ -1.373e-7■□□□□ 8.7
SND1Q7KZF4 INSIG2-207ENST00000488995 518 ntTSL 36.21□□□□□ -1.423e-6■□□□□ 8.7
SND1Q7KZF4 INSIG2-205ENST00000479999 532 ntTSL 25.28□□□□□ -1.563e-6■□□□□ 8.7
SND1Q7KZF4 TMEM173-209ENST00000511850 890 ntTSL 518■□□□□ 0.471e-9■□□□□ 8.7
SND1Q7KZF4 CLTC-206ENST00000475458 479 ntTSL 26.75□□□□□ -1.333e-10■□□□□ 8.7
SND1Q7KZF4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.629e-7■□□□□ 8.7
SND1Q7KZF4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.841e-7■□□□□ 8.7
SND1Q7KZF4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.781e-7■□□□□ 8.7
SND1Q7KZF4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.99■□□□□ 0.637e-7■□□□□ 8.7
SND1Q7KZF4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.427e-7■□□□□ 8.7
SND1Q7KZF4 DAP-203ENST00000508253 785 ntTSL 215.53■□□□□ 0.087e-7■□□□□ 8.7
SND1Q7KZF4 SLC6A8-207ENST00000466243 544 ntTSL 214.12□□□□□ -0.152e-14■□□□□ 8.7
SND1Q7KZF4 SRPRA-202ENST00000527817 687 ntTSL 212.79□□□□□ -0.361e-7■□□□□ 8.7
SND1Q7KZF4 SRPRA-205ENST00000531104 542 ntTSL 211.44□□□□□ -0.581e-7■□□□□ 8.7
SND1Q7KZF4 DAP-206ENST00000514882 562 ntTSL 49.96□□□□□ -0.827e-7■□□□□ 8.7
SND1Q7KZF4 PHGDH-228ENST00000641847 692 nt9.73□□□□□ -0.857e-7■□□□□ 8.7
SND1Q7KZF4 PHGDH-217ENST00000641455 312 nt8.18□□□□□ -1.17e-7■□□□□ 8.7
SND1Q7KZF4 TM9SF3-205ENST00000485093 407 ntTSL 56.73□□□□□ -1.337e-7■□□□□ 8.7
SND1Q7KZF4 ATP5B-211ENST00000553007 814 ntTSL 519.53■□□□□ 0.722e-13■□□□□ 8.7
SND1Q7KZF4 RAB10-204ENST00000495146 1292 ntTSL 523.81■■□□□ 1.42e-10■□□□□ 8.7
SND1Q7KZF4 MINOS1-202ENST00000462646 335 ntTSL 319.4■□□□□ 0.71e-6■□□□□ 8.7
SND1Q7KZF4 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-10■□□□□ 8.7
SND1Q7KZF4 RAB10-202ENST00000462003 584 ntTSL 47.99□□□□□ -1.132e-10■□□□□ 8.7
SND1Q7KZF4 RAB10-203ENST00000473035 571 ntTSL 47.16□□□□□ -1.262e-10■□□□□ 8.7
SND1Q7KZF4 SPTAN1-219ENST00000629378 585 ntTSL 29.25□□□□□ -0.935e-9■□□□□ 8.7
SND1Q7KZF4 SLC26A6-215ENST00000466257 706 ntTSL 38.97□□□□□ -0.973e-9■□□□□ 8.7
SND1Q7KZF4 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)16■□□□□ 0.154e-13■□□□□ 8.7
SND1Q7KZF4 ARL6IP1-207ENST00000567969 581 ntTSL 219.48■□□□□ 0.716e-17■□□□□ 8.7
SND1Q7KZF4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.892e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.81■■□□□ 1.882e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.81■■□□□ 1.882e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-234ENST00000477931 1663 ntTSL 1 (best)24.5■■□□□ 1.512e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.42e-10■□□□□ 8.7
SND1Q7KZF4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.082e-10■□□□□ 8.7
SND1Q7KZF4 COX5B-202ENST00000464949 613 ntTSL 520.92■□□□□ 0.942e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-238ENST00000480975 1534 ntTSL 520.62■□□□□ 0.892e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.94■□□□□ 0.142e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-222ENST00000464624 3764 ntTSL 515.59■□□□□ 0.092e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC14.43□□□□□ -0.12e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-245ENST00000487862 1782 ntTSL 212.54□□□□□ -0.42e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-232ENST00000476196 1839 ntTSL 212.12□□□□□ -0.472e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC11.78□□□□□ -0.522e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-247ENST00000488546 897 ntTSL 511.45□□□□□ -0.582e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC10.81□□□□□ -0.682e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-231ENST00000475610 493 ntTSL 1 (best)10.64□□□□□ -0.712e-10■□□□□ 8.7
SND1Q7KZF4 COX5B-203ENST00000491989 611 ntTSL 39.62□□□□□ -0.872e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-254ENST00000494081 557 ntTSL 59.53□□□□□ -0.882e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-255ENST00000496934 2837 ntTSL 28.62□□□□□ -1.032e-10■□□□□ 8.7
SND1Q7KZF4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.96□□□□□ -1.462e-10■□□□□ 8.7
SND1Q7KZF4 CPD-206ENST00000583275 415 ntTSL 27.63□□□□□ -1.197e-12■□□□□ 8.7
SND1Q7KZF4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.29■□□□□ 0.846e-7■□□□□ 8.7
SND1Q7KZF4 VIM-204ENST00000478746 757 ntTSL 217.84■□□□□ 0.458e-29■□□□□ 8.7
SND1Q7KZF4 VIM-208ENST00000497849 634 ntTSL 217.11■□□□□ 0.338e-29■□□□□ 8.7
SND1Q7KZF4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.781e-6■□□□□ 8.7
SND1Q7KZF4 HSPD1-209ENST00000452200 888 ntTSL 59.46□□□□□ -0.95e-9■□□□□ 8.7
SND1Q7KZF4 HSPD1-208ENST00000440114 619 ntTSL 58.16□□□□□ -1.15e-9■□□□□ 8.7
SND1Q7KZF4 HSPD1-213ENST00000486181 648 ntTSL 27.08□□□□□ -1.285e-9■□□□□ 8.7
SND1Q7KZF4 HSPD1-206ENST00000430176 754 ntTSL 55.4□□□□□ -1.545e-9■□□□□ 8.7
SND1Q7KZF4 SGSH-205ENST00000571075 578 ntTSL 220.45■□□□□ 0.861e-7■□□□□ 8.7
SND1Q7KZF4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.427e-7■□□□□ 8.6
SND1Q7KZF4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.427e-7■□□□□ 8.6
SND1Q7KZF4 TMC6-209ENST00000588087 2384 ntTSL 223.72■■□□□ 1.397e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.357e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-224ENST00000638076 2323 ntTSL 1 (best)23.26■■□□□ 1.317e-7■□□□□ 8.6
SND1Q7KZF4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.03■■□□□ 1.287e-7■□□□□ 8.6
SND1Q7KZF4 GLUL-210ENST00000484996 1369 ntTSL 321.71■■□□□ 1.071e-19■□□□□ 8.6
SND1Q7KZF4 ID1-201ENST00000376105 1233 ntBASIC21.61■■□□□ 1.052e-11■□□□□ 8.6
SND1Q7KZF4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.78■□□□□ 0.927e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-222ENST00000637667 874 ntTSL 1 (best)20.66■□□□□ 0.97e-7■□□□□ 8.6
SND1Q7KZF4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.46■□□□□ 0.877e-7■□□□□ 8.6
SND1Q7KZF4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.772e-11■□□□□ 8.6
Retrieved 100 of 13,567 protein–RNA pairs in 292.2 ms