RNA–Protein interactions for RNA: ENST00000464949.5

COX5B-202, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 5

Gene COX5B, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-202ENST00000464949 NISCHQ9Y2I1 1504 aa50.84■■■■■ 5.73
COX5B-202ENST00000464949 CCDC180Q9P1Z9 1646 aa45.45■■■■■ 4.87
COX5B-202ENST00000464949 ABCC9O60706 1549 aa45.26■■■■■ 4.84
COX5B-202ENST00000464949 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
COX5B-202ENST00000464949 NACADO15069 1562 aa42.89■■■■■ 4.46
COX5B-202ENST00000464949 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
COX5B-202ENST00000464949 MYO15BQ96JP2 1530 aa42.36■■■■■ 4.37
COX5B-202ENST00000464949 UNC13AQ9UPW8 1703 aa42.32■■■■■ 4.37
COX5B-202ENST00000464949 DNAJC5BQ9UF47 199 aa42.32■■■■■ 4.37
COX5B-202ENST00000464949 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.354e-8■□□□□ 9.7
COX5B-202ENST00000464949 ZCCHC6Q5VYS8 1495 aaKnown RBP42.18■■■■■ 4.34
COX5B-202ENST00000464949 BICRAQ9NZM4 1560 aa41.98■■■■■ 4.31
COX5B-202ENST00000464949 DCAF1Q9Y4B6 1507 aa41.95■■■■■ 4.31
COX5B-202ENST00000464949 SCRIBQ14160 1630 aa41.51■■■■■ 4.23
COX5B-202ENST00000464949 SHROOM4Q9ULL8 1493 aa41.22■■■■■ 4.19
COX5B-202ENST00000464949 CC2D2AQ9P2K1 1620 aa40.9■■■■■ 4.14
COX5B-202ENST00000464949 EIF4G1Q04637 1599 aaKnown RBP40.86■■■■■ 4.13
COX5B-202ENST00000464949 CECR2Q9BXF3 1484 aa40.7■■■■■ 4.11
COX5B-202ENST00000464949 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
COX5B-202ENST00000464949 SMARCA4P51532 1647 aa39.61■■■■□ 3.93
COX5B-202ENST00000464949 ATAD2BQ9ULI0 1458 aa39.57■■■■□ 3.93
COX5B-202ENST00000464949 SMARCA2P51531 1590 aa39.4■■■■□ 3.9
COX5B-202ENST00000464949 BAZ1AQ9NRL2 1556 aaPredicted RBP39.39■■■■□ 3.9
COX5B-202ENST00000464949 HMGXB3Q12766 1538 aa39.33■■■■□ 3.89
COX5B-202ENST00000464949 MROH2BQ7Z745 1585 aa39.24■■■■□ 3.87
COX5B-202ENST00000464949 PEG3Q9GZU2 1588 aa39.19■■■■□ 3.86
COX5B-202ENST00000464949 BAZ1BQ9UIG0 1483 aaKnown RBP39.16■■■■□ 3.86
COX5B-202ENST00000464949 NESP48681 1621 aa39.01■■■■□ 3.84
COX5B-202ENST00000464949 ERCC6Q03468 1493 aa38.96■■■■□ 3.83
COX5B-202ENST00000464949 WIZO95785 1651 aa38.8■■■■□ 3.8
COX5B-202ENST00000464949 CUX2O14529 1486 aa38.79■■■■□ 3.8
COX5B-202ENST00000464949 LAMC3Q9Y6N6 1575 aa38.65■■■■□ 3.78
COX5B-202ENST00000464949 DNAJC5Q9H3Z4 198 aa38.52■■■■□ 3.76
COX5B-202ENST00000464949 THOC2Q8NI27 1593 aaKnown RBP38.51■■■■□ 3.76
COX5B-202ENST00000464949 KIF21AQ7Z4S6 1674 aa38.51■■■■□ 3.76
COX5B-202ENST00000464949 RSF1Q96T23 1441 aaPredicted RBP38.5■■■■□ 3.75
COX5B-202ENST00000464949 CADPSQ9ULU8 1353 aa38.43■■■■□ 3.74
COX5B-202ENST00000464949 PDS5BQ9NTI5 1447 aa38.39■■■■□ 3.74
COX5B-202ENST00000464949 TOP2AP11388 1531 aaKnown RBP38.23■■■■□ 3.71
COX5B-202ENST00000464949 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
COX5B-202ENST00000464949 CFTRP13569 1480 aa38.06■■■■□ 3.68
COX5B-202ENST00000464949 FANCD2Q9BXW9 1451 aa38■■■■□ 3.67
COX5B-202ENST00000464949 WDR62O43379 1518 aa38■■■■□ 3.67
COX5B-202ENST00000464949 CEP164Q9UPV0 1460 aa37.98■■■■□ 3.67
COX5B-202ENST00000464949 CCDC88BA6NC98 1476 aa37.85■■■■□ 3.65
COX5B-202ENST00000464949 PRDM2Q13029 1718 aa37.73■■■■□ 3.63
COX5B-202ENST00000464949 URB2Q14146 1524 aaKnown RBP37.72■■■■□ 3.63
COX5B-202ENST00000464949 TOPBP1Q92547 1522 aa37.33■■■■□ 3.57
COX5B-202ENST00000464949 ZNF608Q9ULD9 1512 aaPredicted RBP37.23■■■■□ 3.55
COX5B-202ENST00000464949 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
COX5B-202ENST00000464949 DNMBPQ6XZF7 1577 aa37.19■■■■□ 3.54
COX5B-202ENST00000464949 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
COX5B-202ENST00000464949 OSCARQ8IYS5 282 aa37.09■■■■□ 3.53
COX5B-202ENST00000464949 TARBP1Q13395 1621 aaKnown RBP37.02■■■■□ 3.52
COX5B-202ENST00000464949 SUPT5HO00267 1087 aaKnown RBP37.01■■■■□ 3.52
COX5B-202ENST00000464949 EIF4G3O43432 1585 aaKnown RBP36.99■■■■□ 3.51
COX5B-202ENST00000464949 POLA1P09884 1462 aaPredicted RBP36.97■■■■□ 3.51
COX5B-202ENST00000464949 TRIM41Q8WV44 630 aa36.96■■■■□ 3.51
COX5B-202ENST00000464949 AQRO60306 1485 aaKnown RBP eCLIP36.91■■■■□ 3.55e-9■■■■■ 37.5
COX5B-202ENST00000464949 RAD54L2Q9Y4B4 1467 aa36.88■■■■□ 3.5
COX5B-202ENST00000464949 CUX1P39880 1505 aa36.84■■■■□ 3.49
COX5B-202ENST00000464949 SOGA1O94964 1423 aa36.78■■■■□ 3.48
COX5B-202ENST00000464949 FGD5Q6ZNL6 1462 aa36.78■■■■□ 3.48
COX5B-202ENST00000464949 TDRD9Q8NDG6 1382 aaKnown RBP36.72■■■■□ 3.47
COX5B-202ENST00000464949 CHD1O14646 1710 aa36.71■■■■□ 3.47
COX5B-202ENST00000464949 RIMBP3CA6NJZ7 1639 aa36.66■■■■□ 3.46
COX5B-202ENST00000464949 RIMBP3BA6NNM3 1639 aa36.66■■■■□ 3.46
COX5B-202ENST00000464949 RIMBP3Q9UFD9 1639 aa36.66■■■■□ 3.46
COX5B-202ENST00000464949 FBLN2P98095 1184 aa36.55■■■■□ 3.44
COX5B-202ENST00000464949 WDR97A6NE52 1622 aa36.54■■■■□ 3.44
COX5B-202ENST00000464949 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
COX5B-202ENST00000464949 SNAPC4Q5SXM2 1469 aa36.5■■■■□ 3.43
COX5B-202ENST00000464949 GRIN2BQ13224 1484 aa36.41■■■■□ 3.42
COX5B-202ENST00000464949 MAGI1Q96QZ7 1491 aaPredicted RBP36.36■■■■□ 3.41
COX5B-202ENST00000464949 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
COX5B-202ENST00000464949 ABCA10Q8WWZ4 1543 aa36.35■■■■□ 3.41
COX5B-202ENST00000464949 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
COX5B-202ENST00000464949 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
COX5B-202ENST00000464949 CHMP7Q8WUX9 453 aaPredicted RBP36.3■■■■□ 3.4
COX5B-202ENST00000464949 SYNJ1O43426 1573 aa36.3■■■■□ 3.4
COX5B-202ENST00000464949 BIVM-ERCC5R4GMW8 1640 aa36.29■■■■□ 3.4
COX5B-202ENST00000464949 TOP2BQ02880 1626 aa36.27■■■■□ 3.4
COX5B-202ENST00000464949 CYB5RLQ6IPT4 315 aa36.26■■■■□ 3.4
COX5B-202ENST00000464949 WRNQ14191 1432 aaPredicted RBP eCLIP36.25■■■■□ 3.39
COX5B-202ENST00000464949 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
COX5B-202ENST00000464949 CLASP1Q7Z460 1538 aa36.25■■■■□ 3.39
COX5B-202ENST00000464949 ARAP1Q96P48 1450 aa36.22■■■■□ 3.39
COX5B-202ENST00000464949 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
COX5B-202ENST00000464949 GRIN2AQ12879 1464 aa35.96■■■■□ 3.35
COX5B-202ENST00000464949 CEP170Q5SW79 1584 aa35.88■■■■□ 3.33
COX5B-202ENST00000464949 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
COX5B-202ENST00000464949 FHAD1B1AJZ9 1412 aa35.87■■■■□ 3.33
COX5B-202ENST00000464949 NUP160Q12769 1436 aa35.83■■■■□ 3.33
COX5B-202ENST00000464949 ERCC6L2Q5T890 1561 aa35.81■■■■□ 3.32
COX5B-202ENST00000464949 TRHP20396 242 aaPredicted RBP35.71■■■■□ 3.31
COX5B-202ENST00000464949 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
COX5B-202ENST00000464949 IGF1RP08069 1367 aa35.56■■■■□ 3.28
COX5B-202ENST00000464949 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
COX5B-202ENST00000464949 RUSC2Q8N2Y8 1516 aa35.48■■■■□ 3.27
COX5B-202ENST00000464949 JPH4Q96JJ6 628 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms