RNA–Protein interactions for RNA: ENST00000599107.1

KCNN4-204, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-204ENST00000599107 NISCHQ9Y2I1 1504 aa47.25■■■■■ 5.15
KCNN4-204ENST00000599107 CCDC180Q9P1Z9 1646 aa42.01■■■■■ 4.32
KCNN4-204ENST00000599107 ABCC9O60706 1549 aa41.53■■■■■ 4.24
KCNN4-204ENST00000599107 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
KCNN4-204ENST00000599107 ZCCHC6Q5VYS8 1495 aaKnown RBP39.47■■■■□ 3.91
KCNN4-204ENST00000599107 NACADO15069 1562 aa39.35■■■■□ 3.89
KCNN4-204ENST00000599107 MYO15BQ96JP2 1530 aa39.32■■■■□ 3.89
KCNN4-204ENST00000599107 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
KCNN4-204ENST00000599107 DNAJC5BQ9UF47 199 aa39.06■■■■□ 3.84
KCNN4-204ENST00000599107 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
KCNN4-204ENST00000599107 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
KCNN4-204ENST00000599107 PABPN1Q86U42 306 aaKnown RBP eCLIP38.62■■■■□ 3.77
KCNN4-204ENST00000599107 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
KCNN4-204ENST00000599107 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
KCNN4-204ENST00000599107 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
KCNN4-204ENST00000599107 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
KCNN4-204ENST00000599107 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.59
KCNN4-204ENST00000599107 CECR2Q9BXF3 1484 aa37.42■■■■□ 3.58
KCNN4-204ENST00000599107 BAZ1AQ9NRL2 1556 aaPredicted RBP36.65■■■■□ 3.46
KCNN4-204ENST00000599107 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
KCNN4-204ENST00000599107 MROH2BQ7Z745 1585 aa36.35■■■■□ 3.41
KCNN4-204ENST00000599107 SMARCA2P51531 1590 aa36.34■■■■□ 3.41
KCNN4-204ENST00000599107 PEG3Q9GZU2 1588 aa36.34■■■■□ 3.41
KCNN4-204ENST00000599107 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
KCNN4-204ENST00000599107 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
KCNN4-204ENST00000599107 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
KCNN4-204ENST00000599107 RSF1Q96T23 1441 aaPredicted RBP36.06■■■■□ 3.36
KCNN4-204ENST00000599107 BAZ1BQ9UIG0 1483 aaKnown RBP36■■■■□ 3.35
KCNN4-204ENST00000599107 WIZO95785 1651 aa35.98■■■■□ 3.35
KCNN4-204ENST00000599107 DNAJC5Q9H3Z4 198 aa35.86■■■■□ 3.33
KCNN4-204ENST00000599107 CUX2O14529 1486 aa35.83■■■■□ 3.33
KCNN4-204ENST00000599107 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
KCNN4-204ENST00000599107 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
KCNN4-204ENST00000599107 NESP48681 1621 aa35.69■■■■□ 3.3
KCNN4-204ENST00000599107 LAMC3Q9Y6N6 1575 aa35.42■■■■□ 3.26
KCNN4-204ENST00000599107 THOC2Q8NI27 1593 aaKnown RBP35.38■■■■□ 3.25
KCNN4-204ENST00000599107 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
KCNN4-204ENST00000599107 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
KCNN4-204ENST00000599107 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
KCNN4-204ENST00000599107 PDS5BQ9NTI5 1447 aa35.16■■■■□ 3.22
KCNN4-204ENST00000599107 CADPSQ9ULU8 1353 aa35.16■■■■□ 3.22
KCNN4-204ENST00000599107 CFTRP13569 1480 aa35.07■■■■□ 3.2
KCNN4-204ENST00000599107 PRDM2Q13029 1718 aa34.96■■■■□ 3.19
KCNN4-204ENST00000599107 MRC2Q9UBG0 1479 aa34.9■■■■□ 3.18
KCNN4-204ENST00000599107 WDR62O43379 1518 aa34.86■■■■□ 3.17
KCNN4-204ENST00000599107 FANCD2Q9BXW9 1451 aa34.76■■■■□ 3.15
KCNN4-204ENST00000599107 CEP164Q9UPV0 1460 aa34.74■■■■□ 3.15
KCNN4-204ENST00000599107 URB2Q14146 1524 aaKnown RBP34.47■■■■□ 3.11
KCNN4-204ENST00000599107 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
KCNN4-204ENST00000599107 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
KCNN4-204ENST00000599107 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
KCNN4-204ENST00000599107 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
KCNN4-204ENST00000599107 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
KCNN4-204ENST00000599107 CUX1P39880 1505 aa34.1■■■■□ 3.05
KCNN4-204ENST00000599107 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
KCNN4-204ENST00000599107 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
KCNN4-204ENST00000599107 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
KCNN4-204ENST00000599107 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
KCNN4-204ENST00000599107 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
KCNN4-204ENST00000599107 POLA1P09884 1462 aaPredicted RBP33.98■■■■□ 3.03
KCNN4-204ENST00000599107 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
KCNN4-204ENST00000599107 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
KCNN4-204ENST00000599107 TARBP1Q13395 1621 aaKnown RBP33.89■■■■□ 3.02
KCNN4-204ENST00000599107 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
KCNN4-204ENST00000599107 SOGA1O94964 1423 aa33.8■■■■□ 3
KCNN4-204ENST00000599107 WDR97A6NE52 1622 aa33.8■■■■□ 3
KCNN4-204ENST00000599107 RIMBP3CA6NJZ7 1639 aa33.77■■■■□ 3
KCNN4-204ENST00000599107 RIMBP3BA6NNM3 1639 aa33.77■■■■□ 3
KCNN4-204ENST00000599107 RIMBP3Q9UFD9 1639 aa33.77■■■■□ 3
KCNN4-204ENST00000599107 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
KCNN4-204ENST00000599107 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.981e-6■■□□□ 11.8
KCNN4-204ENST00000599107 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
KCNN4-204ENST00000599107 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
KCNN4-204ENST00000599107 CHD1O14646 1710 aa33.61■■■□□ 2.97
KCNN4-204ENST00000599107 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
KCNN4-204ENST00000599107 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
KCNN4-204ENST00000599107 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
KCNN4-204ENST00000599107 PBRM1Q86U86 1689 aa33.44■■■□□ 2.94
KCNN4-204ENST00000599107 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
KCNN4-204ENST00000599107 FBLN2P98095 1184 aa33.38■■■□□ 2.93
KCNN4-204ENST00000599107 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
KCNN4-204ENST00000599107 SNAPC4Q5SXM2 1469 aa33.36■■■□□ 2.93
KCNN4-204ENST00000599107 ARAP1Q96P48 1450 aa33.33■■■□□ 2.93
KCNN4-204ENST00000599107 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
KCNN4-204ENST00000599107 CYB5RLQ6IPT4 315 aa33.31■■■□□ 2.92
KCNN4-204ENST00000599107 KIF27Q86VH2 1401 aa33.29■■■□□ 2.92
KCNN4-204ENST00000599107 CLASP1Q7Z460 1538 aa33.25■■■□□ 2.91
KCNN4-204ENST00000599107 SYNJ2O15056 1496 aa33.19■■■□□ 2.9
KCNN4-204ENST00000599107 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
KCNN4-204ENST00000599107 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
KCNN4-204ENST00000599107 CHIC1Q5VXU3 224 aa33.12■■■□□ 2.89
KCNN4-204ENST00000599107 CUL7Q14999 1698 aa33.12■■■□□ 2.89
KCNN4-204ENST00000599107 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
KCNN4-204ENST00000599107 IGF1RP08069 1367 aa33.05■■■□□ 2.88
KCNN4-204ENST00000599107 GRIN2AQ12879 1464 aa33■■■□□ 2.87
KCNN4-204ENST00000599107 EEA1Q15075 1411 aa32.97■■■□□ 2.87
KCNN4-204ENST00000599107 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
KCNN4-204ENST00000599107 TRHP20396 242 aaPredicted RBP32.92■■■□□ 2.86
KCNN4-204ENST00000599107 NUP160Q12769 1436 aa32.86■■■□□ 2.85
KCNN4-204ENST00000599107 CARMIL1Q5VZK9 1371 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms