RNA–Protein interactions for RNA: ENST00000488546.5

GNAS-247, Transcript of GNAS complex locus, humanhuman

TSL 5

Gene GNAS, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-247ENST00000488546 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
GNAS-247ENST00000488546 ABCC9O60706 1549 aa27.57■■■□□ 2
GNAS-247ENST00000488546 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
GNAS-247ENST00000488546 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
GNAS-247ENST00000488546 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
GNAS-247ENST00000488546 RB1CC1Q8TDY2 1594 aa25.55■■□□□ 1.68
GNAS-247ENST00000488546 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
GNAS-247ENST00000488546 NACADO15069 1562 aa25.05■■□□□ 1.6
GNAS-247ENST00000488546 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
GNAS-247ENST00000488546 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
GNAS-247ENST00000488546 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
GNAS-247ENST00000488546 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
GNAS-247ENST00000488546 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
GNAS-247ENST00000488546 EIF4G1Q04637 1599 aaKnown RBP24.4■■□□□ 1.5
GNAS-247ENST00000488546 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
GNAS-247ENST00000488546 CUX2O14529 1486 aa24.32■■□□□ 1.48
GNAS-247ENST00000488546 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
GNAS-247ENST00000488546 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
GNAS-247ENST00000488546 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
GNAS-247ENST00000488546 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
GNAS-247ENST00000488546 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
GNAS-247ENST00000488546 NESP48681 1621 aa23.3■■□□□ 1.32
GNAS-247ENST00000488546 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
GNAS-247ENST00000488546 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
GNAS-247ENST00000488546 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
GNAS-247ENST00000488546 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
GNAS-247ENST00000488546 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
GNAS-247ENST00000488546 SMARCA2P51531 1590 aa23■■□□□ 1.27
GNAS-247ENST00000488546 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
GNAS-247ENST00000488546 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
GNAS-247ENST00000488546 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
GNAS-247ENST00000488546 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
GNAS-247ENST00000488546 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
GNAS-247ENST00000488546 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
GNAS-247ENST00000488546 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
GNAS-247ENST00000488546 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
GNAS-247ENST00000488546 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
GNAS-247ENST00000488546 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
GNAS-247ENST00000488546 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
GNAS-247ENST00000488546 WDR62O43379 1518 aa22.65■■□□□ 1.22
GNAS-247ENST00000488546 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
GNAS-247ENST00000488546 CYB5RLQ6IPT4 315 aa22.6■■□□□ 1.21
GNAS-247ENST00000488546 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
GNAS-247ENST00000488546 ILDR1Q86SU0 546 aaPredicted RBP22.49■■□□□ 1.19
GNAS-247ENST00000488546 SMARCA4P51532 1647 aa22.48■■□□□ 1.19
GNAS-247ENST00000488546 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
GNAS-247ENST00000488546 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
GNAS-247ENST00000488546 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
GNAS-247ENST00000488546 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
GNAS-247ENST00000488546 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
GNAS-247ENST00000488546 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
GNAS-247ENST00000488546 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
GNAS-247ENST00000488546 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
GNAS-247ENST00000488546 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
GNAS-247ENST00000488546 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
GNAS-247ENST00000488546 CFTRP13569 1480 aa21.88■■□□□ 1.09
GNAS-247ENST00000488546 CHD1O14646 1710 aa21.84■■□□□ 1.09
GNAS-247ENST00000488546 FBLN2P98095 1184 aa21.81■■□□□ 1.08
GNAS-247ENST00000488546 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
GNAS-247ENST00000488546 KDM4FA0A1W2PPD8 638 aa21.72■■□□□ 1.07
GNAS-247ENST00000488546 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.064e-9■■■■□ 20.3
GNAS-247ENST00000488546 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
GNAS-247ENST00000488546 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
GNAS-247ENST00000488546 WIZO95785 1651 aa21.56■■□□□ 1.04
GNAS-247ENST00000488546 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
GNAS-247ENST00000488546 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
GNAS-247ENST00000488546 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
GNAS-247ENST00000488546 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
GNAS-247ENST00000488546 FBXO41Q8TF61 875 aa21.4■■□□□ 1.02
GNAS-247ENST00000488546 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
GNAS-247ENST00000488546 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
GNAS-247ENST00000488546 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
GNAS-247ENST00000488546 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
GNAS-247ENST00000488546 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
GNAS-247ENST00000488546 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
GNAS-247ENST00000488546 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
GNAS-247ENST00000488546 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
GNAS-247ENST00000488546 HECW2Q9P2P5 1572 aa21.26■□□□□ 0.99
GNAS-247ENST00000488546 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
GNAS-247ENST00000488546 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
GNAS-247ENST00000488546 LMTK3Q96Q04 1460 aa21.23■□□□□ 0.99
GNAS-247ENST00000488546 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
GNAS-247ENST00000488546 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
GNAS-247ENST00000488546 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
GNAS-247ENST00000488546 SOGA1O94964 1423 aa21.17■□□□□ 0.98
GNAS-247ENST00000488546 KDM6BO15054 1643 aa21.15■□□□□ 0.98
GNAS-247ENST00000488546 SOCS7O14512 581 aa21.14■□□□□ 0.97
GNAS-247ENST00000488546 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
GNAS-247ENST00000488546 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
GNAS-247ENST00000488546 ADGRL1O94910 1474 aa21.11■□□□□ 0.97
GNAS-247ENST00000488546 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
GNAS-247ENST00000488546 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
GNAS-247ENST00000488546 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
GNAS-247ENST00000488546 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
GNAS-247ENST00000488546 DIP2BQ9P265 1576 aa20.98■□□□□ 0.95
GNAS-247ENST00000488546 MAPKBP1O60336 1514 aa20.93■□□□□ 0.94
GNAS-247ENST00000488546 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
GNAS-247ENST00000488546 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
GNAS-247ENST00000488546 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
GNAS-247ENST00000488546 NUP160Q12769 1436 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms