RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 NISCHQ9Y2I1 1504 aa22.4■■□□□ 1.18
SPTAN1-219ENST00000629378 ABCC9O60706 1549 aa20.04■□□□□ 0.8
SPTAN1-219ENST00000629378 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
SPTAN1-219ENST00000629378 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
SPTAN1-219ENST00000629378 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
SPTAN1-219ENST00000629378 NACADO15069 1562 aa18.9■□□□□ 0.62
SPTAN1-219ENST00000629378 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
SPTAN1-219ENST00000629378 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
SPTAN1-219ENST00000629378 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
SPTAN1-219ENST00000629378 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
SPTAN1-219ENST00000629378 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
SPTAN1-219ENST00000629378 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
SPTAN1-219ENST00000629378 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
SPTAN1-219ENST00000629378 SCRIBQ14160 1630 aa18.33■□□□□ 0.52
SPTAN1-219ENST00000629378 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
SPTAN1-219ENST00000629378 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
SPTAN1-219ENST00000629378 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
SPTAN1-219ENST00000629378 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SPTAN1-219ENST00000629378 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
SPTAN1-219ENST00000629378 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
SPTAN1-219ENST00000629378 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
SPTAN1-219ENST00000629378 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
SPTAN1-219ENST00000629378 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
SPTAN1-219ENST00000629378 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
SPTAN1-219ENST00000629378 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
SPTAN1-219ENST00000629378 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
SPTAN1-219ENST00000629378 NESP48681 1621 aa17.26■□□□□ 0.35
SPTAN1-219ENST00000629378 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
SPTAN1-219ENST00000629378 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SPTAN1-219ENST00000629378 CUX2O14529 1486 aa17.13■□□□□ 0.33
SPTAN1-219ENST00000629378 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
SPTAN1-219ENST00000629378 WIZO95785 1651 aa17.13■□□□□ 0.33
SPTAN1-219ENST00000629378 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
SPTAN1-219ENST00000629378 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.32
SPTAN1-219ENST00000629378 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
SPTAN1-219ENST00000629378 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
SPTAN1-219ENST00000629378 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
SPTAN1-219ENST00000629378 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
SPTAN1-219ENST00000629378 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
SPTAN1-219ENST00000629378 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
SPTAN1-219ENST00000629378 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
SPTAN1-219ENST00000629378 CFTRP13569 1480 aa16.77■□□□□ 0.28
SPTAN1-219ENST00000629378 WDR62O43379 1518 aa16.76■□□□□ 0.27
SPTAN1-219ENST00000629378 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
SPTAN1-219ENST00000629378 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
SPTAN1-219ENST00000629378 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
SPTAN1-219ENST00000629378 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
SPTAN1-219ENST00000629378 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
SPTAN1-219ENST00000629378 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
SPTAN1-219ENST00000629378 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
SPTAN1-219ENST00000629378 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
SPTAN1-219ENST00000629378 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
SPTAN1-219ENST00000629378 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
SPTAN1-219ENST00000629378 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
SPTAN1-219ENST00000629378 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
SPTAN1-219ENST00000629378 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.27e-7■■■□□ 17.4
SPTAN1-219ENST00000629378 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
SPTAN1-219ENST00000629378 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
SPTAN1-219ENST00000629378 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
SPTAN1-219ENST00000629378 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
SPTAN1-219ENST00000629378 SOGA1O94964 1423 aa16.26■□□□□ 0.19
SPTAN1-219ENST00000629378 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
SPTAN1-219ENST00000629378 CUX1P39880 1505 aa16.24■□□□□ 0.19
SPTAN1-219ENST00000629378 CHD1O14646 1710 aa16.23■□□□□ 0.19
SPTAN1-219ENST00000629378 FBLN2P98095 1184 aa16.23■□□□□ 0.19
SPTAN1-219ENST00000629378 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
SPTAN1-219ENST00000629378 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
SPTAN1-219ENST00000629378 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
SPTAN1-219ENST00000629378 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
SPTAN1-219ENST00000629378 ARHGEF11O15085 1522 aa16.15■□□□□ 0.18
SPTAN1-219ENST00000629378 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
SPTAN1-219ENST00000629378 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
SPTAN1-219ENST00000629378 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
SPTAN1-219ENST00000629378 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
SPTAN1-219ENST00000629378 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
SPTAN1-219ENST00000629378 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
SPTAN1-219ENST00000629378 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
SPTAN1-219ENST00000629378 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-219ENST00000629378 ARAP1Q96P48 1450 aa16.02■□□□□ 0.15
SPTAN1-219ENST00000629378 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
SPTAN1-219ENST00000629378 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
SPTAN1-219ENST00000629378 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
SPTAN1-219ENST00000629378 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
SPTAN1-219ENST00000629378 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
SPTAN1-219ENST00000629378 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
SPTAN1-219ENST00000629378 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
SPTAN1-219ENST00000629378 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
SPTAN1-219ENST00000629378 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
SPTAN1-219ENST00000629378 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
SPTAN1-219ENST00000629378 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
SPTAN1-219ENST00000629378 CEP170Q5SW79 1584 aa15.83■□□□□ 0.13
SPTAN1-219ENST00000629378 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.13
SPTAN1-219ENST00000629378 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
SPTAN1-219ENST00000629378 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
SPTAN1-219ENST00000629378 NUP160Q12769 1436 aa15.79■□□□□ 0.12
SPTAN1-219ENST00000629378 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
SPTAN1-219ENST00000629378 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
SPTAN1-219ENST00000629378 IGF1RP08069 1367 aa15.69■□□□□ 0.1
SPTAN1-219ENST00000629378 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
SPTAN1-219ENST00000629378 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms