RNA–Protein interactions for RNA: ENST00000583275.1

CPD-206, Transcript of carboxypeptidase D, humanhuman

TSL 2

Gene CPD, Length 415 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-206ENST00000583275 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
CPD-206ENST00000583275 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
CPD-206ENST00000583275 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
CPD-206ENST00000583275 ABCC9O60706 1549 aa16.8■□□□□ 0.28
CPD-206ENST00000583275 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.27
CPD-206ENST00000583275 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
CPD-206ENST00000583275 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
CPD-206ENST00000583275 NACADO15069 1562 aa15.85■□□□□ 0.13
CPD-206ENST00000583275 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CPD-206ENST00000583275 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
CPD-206ENST00000583275 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
CPD-206ENST00000583275 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
CPD-206ENST00000583275 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
CPD-206ENST00000583275 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
CPD-206ENST00000583275 DCAF1Q9Y4B6 1507 aa15.42■□□□□ 0.06
CPD-206ENST00000583275 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
CPD-206ENST00000583275 SCRIBQ14160 1630 aa15.21■□□□□ 0.03
CPD-206ENST00000583275 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
CPD-206ENST00000583275 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
CPD-206ENST00000583275 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
CPD-206ENST00000583275 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
CPD-206ENST00000583275 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
CPD-206ENST00000583275 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
CPD-206ENST00000583275 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
CPD-206ENST00000583275 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
CPD-206ENST00000583275 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
CPD-206ENST00000583275 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
CPD-206ENST00000583275 CUX2O14529 1486 aa14.52□□□□□ -0.08
CPD-206ENST00000583275 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
CPD-206ENST00000583275 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
CPD-206ENST00000583275 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
CPD-206ENST00000583275 NESP48681 1621 aa14.43□□□□□ -0.1
CPD-206ENST00000583275 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
CPD-206ENST00000583275 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
CPD-206ENST00000583275 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
CPD-206ENST00000583275 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
CPD-206ENST00000583275 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
CPD-206ENST00000583275 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
CPD-206ENST00000583275 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
CPD-206ENST00000583275 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
CPD-206ENST00000583275 WIZO95785 1651 aa14.17□□□□□ -0.14
CPD-206ENST00000583275 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
CPD-206ENST00000583275 WDR62O43379 1518 aa14.08□□□□□ -0.16
CPD-206ENST00000583275 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
CPD-206ENST00000583275 CFTRP13569 1480 aa14.05□□□□□ -0.16
CPD-206ENST00000583275 FOXD1Q16676 465 aa14.04□□□□□ -0.16
CPD-206ENST00000583275 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
CPD-206ENST00000583275 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
CPD-206ENST00000583275 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
CPD-206ENST00000583275 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
CPD-206ENST00000583275 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
CPD-206ENST00000583275 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
CPD-206ENST00000583275 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
CPD-206ENST00000583275 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
CPD-206ENST00000583275 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
CPD-206ENST00000583275 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
CPD-206ENST00000583275 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
CPD-206ENST00000583275 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
CPD-206ENST00000583275 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
CPD-206ENST00000583275 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
CPD-206ENST00000583275 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
CPD-206ENST00000583275 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
CPD-206ENST00000583275 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
CPD-206ENST00000583275 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPD-206ENST00000583275 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
CPD-206ENST00000583275 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
CPD-206ENST00000583275 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
CPD-206ENST00000583275 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
CPD-206ENST00000583275 SOGA1O94964 1423 aa13.56□□□□□ -0.24
CPD-206ENST00000583275 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
CPD-206ENST00000583275 FBLN2P98095 1184 aa13.55□□□□□ -0.24
CPD-206ENST00000583275 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
CPD-206ENST00000583275 CHD1O14646 1710 aa13.53□□□□□ -0.24
CPD-206ENST00000583275 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
CPD-206ENST00000583275 CUX1P39880 1505 aa13.5□□□□□ -0.25
CPD-206ENST00000583275 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
CPD-206ENST00000583275 WDR97A6NE52 1622 aa13.48□□□□□ -0.25
CPD-206ENST00000583275 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
CPD-206ENST00000583275 CHMP7Q8WUX9 453 aaPredicted RBP13.45□□□□□ -0.26
CPD-206ENST00000583275 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
CPD-206ENST00000583275 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
CPD-206ENST00000583275 CLASP1Q7Z460 1538 aa13.43□□□□□ -0.26
CPD-206ENST00000583275 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
CPD-206ENST00000583275 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
CPD-206ENST00000583275 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
CPD-206ENST00000583275 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CPD-206ENST00000583275 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
CPD-206ENST00000583275 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
CPD-206ENST00000583275 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
CPD-206ENST00000583275 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
CPD-206ENST00000583275 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
CPD-206ENST00000583275 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
CPD-206ENST00000583275 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
CPD-206ENST00000583275 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
CPD-206ENST00000583275 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
CPD-206ENST00000583275 NUP160Q12769 1436 aa13.24□□□□□ -0.29
CPD-206ENST00000583275 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
CPD-206ENST00000583275 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
CPD-206ENST00000583275 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
CPD-206ENST00000583275 ERCC6L2Q5T890 1561 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms