RNA–Protein interactions for RNA: ENST00000312175.6

BANF1-201, Transcript of barrier to autointegration factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BANF1, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BANF1-201ENST00000312175 NISCHQ9Y2I1 1504 aa38.55■■■■□ 3.76
BANF1-201ENST00000312175 CCDC180Q9P1Z9 1646 aa34.45■■■■□ 3.11
BANF1-201ENST00000312175 ABCC9O60706 1549 aa34.1■■■■□ 3.05
BANF1-201ENST00000312175 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
BANF1-201ENST00000312175 NACADO15069 1562 aa32.45■■■□□ 2.78
BANF1-201ENST00000312175 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
BANF1-201ENST00000312175 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
BANF1-201ENST00000312175 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
BANF1-201ENST00000312175 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
BANF1-201ENST00000312175 DCAF1Q9Y4B6 1507 aa31.84■■■□□ 2.69
BANF1-201ENST00000312175 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
BANF1-201ENST00000312175 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
BANF1-201ENST00000312175 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
BANF1-201ENST00000312175 SCRIBQ14160 1630 aa31.45■■■□□ 2.62
BANF1-201ENST00000312175 SHROOM4Q9ULL8 1493 aa31.19■■■□□ 2.58
BANF1-201ENST00000312175 EIF4G1Q04637 1599 aaKnown RBP30.84■■■□□ 2.53
BANF1-201ENST00000312175 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
BANF1-201ENST00000312175 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
BANF1-201ENST00000312175 SMARCA4P51532 1647 aa30.02■■■□□ 2.4
BANF1-201ENST00000312175 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
BANF1-201ENST00000312175 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
BANF1-201ENST00000312175 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.38
BANF1-201ENST00000312175 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
BANF1-201ENST00000312175 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
BANF1-201ENST00000312175 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
BANF1-201ENST00000312175 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
BANF1-201ENST00000312175 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
BANF1-201ENST00000312175 WIZO95785 1651 aa29.44■■■□□ 2.3
BANF1-201ENST00000312175 NESP48681 1621 aa29.42■■■□□ 2.3
BANF1-201ENST00000312175 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
BANF1-201ENST00000312175 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
BANF1-201ENST00000312175 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
BANF1-201ENST00000312175 CUX2O14529 1486 aa29.18■■■□□ 2.26
BANF1-201ENST00000312175 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
BANF1-201ENST00000312175 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
BANF1-201ENST00000312175 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
BANF1-201ENST00000312175 TOP2AP11388 1531 aaKnown RBP29.04■■■□□ 2.24
BANF1-201ENST00000312175 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
BANF1-201ENST00000312175 DNAJC5Q9H3Z4 198 aa28.99■■■□□ 2.23
BANF1-201ENST00000312175 CFTRP13569 1480 aa28.8■■■□□ 2.2
BANF1-201ENST00000312175 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
BANF1-201ENST00000312175 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
BANF1-201ENST00000312175 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
BANF1-201ENST00000312175 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
BANF1-201ENST00000312175 WDR62O43379 1518 aa28.7■■■□□ 2.19
BANF1-201ENST00000312175 PRDM2Q13029 1718 aa28.64■■■□□ 2.18
BANF1-201ENST00000312175 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
BANF1-201ENST00000312175 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
BANF1-201ENST00000312175 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
BANF1-201ENST00000312175 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
BANF1-201ENST00000312175 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
BANF1-201ENST00000312175 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
BANF1-201ENST00000312175 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
BANF1-201ENST00000312175 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
BANF1-201ENST00000312175 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
BANF1-201ENST00000312175 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
BANF1-201ENST00000312175 CUX1P39880 1505 aa27.92■■■□□ 2.06
BANF1-201ENST00000312175 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
BANF1-201ENST00000312175 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
BANF1-201ENST00000312175 AQRO60306 1485 aaKnown RBP eCLIP27.88■■■□□ 2.053e-6■■■■□ 19.4
BANF1-201ENST00000312175 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
BANF1-201ENST00000312175 SOGA1O94964 1423 aa27.84■■■□□ 2.05
BANF1-201ENST00000312175 TDRD9Q8NDG6 1382 aaKnown RBP27.75■■■□□ 2.03
BANF1-201ENST00000312175 CHD1O14646 1710 aa27.73■■■□□ 2.03
BANF1-201ENST00000312175 WDR97A6NE52 1622 aa27.7■■■□□ 2.03
BANF1-201ENST00000312175 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
BANF1-201ENST00000312175 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
BANF1-201ENST00000312175 FBLN2P98095 1184 aa27.59■■■□□ 2.01
BANF1-201ENST00000312175 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
BANF1-201ENST00000312175 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
BANF1-201ENST00000312175 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
BANF1-201ENST00000312175 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
BANF1-201ENST00000312175 SYNJ1O43426 1573 aa27.57■■■□□ 2
BANF1-201ENST00000312175 TOP2BQ02880 1626 aa27.56■■■□□ 2
BANF1-201ENST00000312175 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
BANF1-201ENST00000312175 PBRM1Q86U86 1689 aa27.56■■■□□ 2
BANF1-201ENST00000312175 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
BANF1-201ENST00000312175 GRIN2BQ13224 1484 aa27.55■■■□□ 2
BANF1-201ENST00000312175 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
BANF1-201ENST00000312175 GAPVD1Q14C86 1478 aa27.51■■■□□ 2
BANF1-201ENST00000312175 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
BANF1-201ENST00000312175 ARHGEF11O15085 1522 aa27.51■■□□□ 1.99
BANF1-201ENST00000312175 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
BANF1-201ENST00000312175 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
BANF1-201ENST00000312175 CLASP1Q7Z460 1538 aa27.37■■□□□ 1.97
BANF1-201ENST00000312175 ADAMTS12P58397 1594 aa27.28■■□□□ 1.96
BANF1-201ENST00000312175 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
BANF1-201ENST00000312175 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
BANF1-201ENST00000312175 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
BANF1-201ENST00000312175 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
BANF1-201ENST00000312175 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
BANF1-201ENST00000312175 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
BANF1-201ENST00000312175 NUP160Q12769 1436 aa27.1■■□□□ 1.93
BANF1-201ENST00000312175 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
BANF1-201ENST00000312175 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
BANF1-201ENST00000312175 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
BANF1-201ENST00000312175 IGF1RP08069 1367 aa26.95■■□□□ 1.9
BANF1-201ENST00000312175 CUL7Q14999 1698 aa26.91■■□□□ 1.9
BANF1-201ENST00000312175 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
BANF1-201ENST00000312175 TRHP20396 242 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms