RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 NISCHQ9Y2I1 1504 aa44.88■■■■■ 4.78
TMC6-209ENST00000588087 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
TMC6-209ENST00000588087 CCDC180Q9P1Z9 1646 aa38.07■■■■□ 3.68
TMC6-209ENST00000588087 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
TMC6-209ENST00000588087 SUPT5HO00267 1087 aaKnown RBP37.61■■■■□ 3.61
TMC6-209ENST00000588087 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
TMC6-209ENST00000588087 DCAF1Q9Y4B6 1507 aa36.74■■■■□ 3.47
TMC6-209ENST00000588087 CHIC1Q5VXU3 224 aa36.47■■■■□ 3.43
TMC6-209ENST00000588087 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
TMC6-209ENST00000588087 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
TMC6-209ENST00000588087 ABCC9O60706 1549 aa35.8■■■■□ 3.32
TMC6-209ENST00000588087 RSF1Q96T23 1441 aaPredicted RBP35.54■■■■□ 3.28
TMC6-209ENST00000588087 LOC105371045A0A1W2PR82 267 aa35.45■■■■□ 3.27
TMC6-209ENST00000588087 PCGF6Q9BYE7 350 aa35.31■■■■□ 3.24
TMC6-209ENST00000588087 NACADO15069 1562 aa35.26■■■■□ 3.24
TMC6-209ENST00000588087 HRCP23327 699 aa35.22■■■■□ 3.23
TMC6-209ENST00000588087 RB1CC1Q8TDY2 1594 aa35.18■■■■□ 3.22
TMC6-209ENST00000588087 CECR2Q9BXF3 1484 aa35.11■■■■□ 3.21
TMC6-209ENST00000588087 TRIM41Q8WV44 630 aa34.97■■■■□ 3.19
TMC6-209ENST00000588087 MROH2BQ7Z745 1585 aa34.95■■■■□ 3.18
TMC6-209ENST00000588087 FAM9AQ8IZU1 332 aaPredicted RBP34.78■■■■□ 3.16
TMC6-209ENST00000588087 WIZO95785 1651 aa34.72■■■■□ 3.15
TMC6-209ENST00000588087 PPARGC1BQ86YN6 1023 aaKnown RBP34.62■■■■□ 3.13
TMC6-209ENST00000588087 TRIM26Q12899 539 aaPredicted RBP34.57■■■■□ 3.13
TMC6-209ENST00000588087 EHMT2Q96KQ7 1210 aa34.56■■■■□ 3.12
TMC6-209ENST00000588087 BAZ1AQ9NRL2 1556 aaPredicted RBP34.46■■■■□ 3.11
TMC6-209ENST00000588087 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
TMC6-209ENST00000588087 SMARCA4P51532 1647 aa34.18■■■■□ 3.06
TMC6-209ENST00000588087 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
TMC6-209ENST00000588087 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
TMC6-209ENST00000588087 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.04
TMC6-209ENST00000588087 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.041e-10■□□□□ 9.7
TMC6-209ENST00000588087 ABCC8Q09428 1581 aa33.98■■■■□ 3.03
TMC6-209ENST00000588087 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
TMC6-209ENST00000588087 BICRAQ9NZM4 1560 aa33.83■■■■□ 3.01
TMC6-209ENST00000588087 ZEB1P37275 1124 aaPredicted RBP33.71■■■□□ 2.99
TMC6-209ENST00000588087 SOGA1O94964 1423 aa33.68■■■□□ 2.98
TMC6-209ENST00000588087 RUSC2Q8N2Y8 1516 aa33.51■■■□□ 2.96
TMC6-209ENST00000588087 PEG3Q9GZU2 1588 aa33.47■■■□□ 2.95
TMC6-209ENST00000588087 CEP162Q5TB80 1403 aa33.46■■■□□ 2.95
TMC6-209ENST00000588087 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
TMC6-209ENST00000588087 TTBK1Q5TCY1 1321 aaPredicted RBP33.43■■■□□ 2.94
TMC6-209ENST00000588087 WRNQ14191 1432 aaPredicted RBP eCLIP33.39■■■□□ 2.94
TMC6-209ENST00000588087 ATAD2BQ9ULI0 1458 aa33.37■■■□□ 2.93
TMC6-209ENST00000588087 TNIKQ9UKE5 1360 aa33.36■■■□□ 2.93
TMC6-209ENST00000588087 EEA1Q15075 1411 aa33.35■■■□□ 2.93
TMC6-209ENST00000588087 UBTFP17480 764 aaKnown RBP33.34■■■□□ 2.93
TMC6-209ENST00000588087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.32■■■□□ 2.92
TMC6-209ENST00000588087 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
TMC6-209ENST00000588087 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
TMC6-209ENST00000588087 GOLGA3Q08378 1498 aa33.19■■■□□ 2.9
TMC6-209ENST00000588087 CCER1Q8TC90 406 aaPredicted RBP33.18■■■□□ 2.9
TMC6-209ENST00000588087 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
TMC6-209ENST00000588087 KIF21BO75037 1637 aa32.91■■■□□ 2.86
TMC6-209ENST00000588087 CLIP1P30622 1438 aa32.85■■■□□ 2.85
TMC6-209ENST00000588087 RAPGEF2Q9Y4G8 1499 aa32.84■■■□□ 2.85
TMC6-209ENST00000588087 RANGAP1P46060 587 aaPredicted RBP32.81■■■□□ 2.84
TMC6-209ENST00000588087 TOP2BQ02880 1626 aa32.76■■■□□ 2.83
TMC6-209ENST00000588087 NCAPD3P42695 1498 aa32.68■■■□□ 2.82
TMC6-209ENST00000588087 VPS8Q8N3P4 1428 aa32.67■■■□□ 2.82
TMC6-209ENST00000588087 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
TMC6-209ENST00000588087 HNRNPUL2Q1KMD3 747 aaKnown RBP32.61■■■□□ 2.81
TMC6-209ENST00000588087 BIVM-ERCC5R4GMW8 1640 aa32.6■■■□□ 2.81
TMC6-209ENST00000588087 APLP2Q06481 763 aa32.53■■■□□ 2.8
TMC6-209ENST00000588087 CUX1P39880 1505 aa32.53■■■□□ 2.8
TMC6-209ENST00000588087 PRXQ9BXM0 1461 aa32.47■■■□□ 2.79
TMC6-209ENST00000588087 DIEXFQ68CQ4 756 aaKnown RBP32.45■■■□□ 2.79
TMC6-209ENST00000588087 SCAF1Q9H7N4 1312 aaKnown RBP32.44■■■□□ 2.78
TMC6-209ENST00000588087 CFTRP13569 1480 aa32.42■■■□□ 2.78
TMC6-209ENST00000588087 ERICH3Q5RHP9 1530 aa32.39■■■□□ 2.78
TMC6-209ENST00000588087 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
TMC6-209ENST00000588087 ARAP1Q96P48 1450 aa32.33■■■□□ 2.77
TMC6-209ENST00000588087 ZNF316A6NFI3 1004 aaPredicted RBP32.22■■■□□ 2.75
TMC6-209ENST00000588087 KANK4Q5T7N3 995 aaPredicted RBP32.2■■■□□ 2.75
TMC6-209ENST00000588087 NEUROD1Q13562 356 aa32.14■■■□□ 2.74
TMC6-209ENST00000588087 ACIN1Q9UKV3 1341 aaKnown RBP32.12■■■□□ 2.73
TMC6-209ENST00000588087 CUX2O14529 1486 aa32.1■■■□□ 2.73
TMC6-209ENST00000588087 CADPSQ9ULU8 1353 aa32.1■■■□□ 2.73
TMC6-209ENST00000588087 ARHGAP35Q9NRY4 1499 aa32.06■■■□□ 2.72
TMC6-209ENST00000588087 IGF1RP08069 1367 aa32.03■■■□□ 2.72
TMC6-209ENST00000588087 CC2D2AQ9P2K1 1620 aa32.01■■■□□ 2.72
TMC6-209ENST00000588087 PRDM2Q13029 1718 aa31.98■■■□□ 2.71
TMC6-209ENST00000588087 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
TMC6-209ENST00000588087 CENPBP07199 599 aaPredicted RBP31.91■■■□□ 2.7
TMC6-209ENST00000588087 DHX57Q6P158 1386 aaKnown RBP31.89■■■□□ 2.7
TMC6-209ENST00000588087 CARMIL1Q5VZK9 1371 aa31.88■■■□□ 2.69
TMC6-209ENST00000588087 RRBP1Q9P2E9 1410 aaKnown RBP31.87■■■□□ 2.69
TMC6-209ENST00000588087 MIER1Q8N108 512 aa31.81■■■□□ 2.68
TMC6-209ENST00000588087 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
TMC6-209ENST00000588087 ITGAEP38570 1179 aa31.8■■■□□ 2.68
TMC6-209ENST00000588087 CCNB3Q8WWL7 1395 aa31.79■■■□□ 2.68
TMC6-209ENST00000588087 YTHDC1Q96MU7 727 aaKnown RBP31.78■■■□□ 2.68
TMC6-209ENST00000588087 GTF3C3Q9Y5Q9 886 aa31.78■■■□□ 2.68
TMC6-209ENST00000588087 CLSPNQ9HAW4 1339 aa31.72■■■□□ 2.67
TMC6-209ENST00000588087 RAD54L2Q9Y4B4 1467 aa31.7■■■□□ 2.67
TMC6-209ENST00000588087 P3H3Q8IVL6 736 aa31.7■■■□□ 2.66
TMC6-209ENST00000588087 NESP48681 1621 aa31.66■■■□□ 2.66
TMC6-209ENST00000588087 TIAM1Q13009 1591 aa31.65■■■□□ 2.66
TMC6-209ENST00000588087 DNMBPQ6XZF7 1577 aa31.59■■■□□ 2.65
TMC6-209ENST00000588087 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms