RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
TM9SF3-205ENST00000485093 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
TM9SF3-205ENST00000485093 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
TM9SF3-205ENST00000485093 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
TM9SF3-205ENST00000485093 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
TM9SF3-205ENST00000485093 FOXD1Q16676 465 aa17.02■□□□□ 0.32
TM9SF3-205ENST00000485093 MSH5O43196 834 aa16.27■□□□□ 0.2
TM9SF3-205ENST00000485093 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
TM9SF3-205ENST00000485093 PIAS4Q8N2W9 510 aaPredicted RBP15.66■□□□□ 0.1
TM9SF3-205ENST00000485093 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
TM9SF3-205ENST00000485093 ADRA2BP18089 450 aa15.08■□□□□ 0
TM9SF3-205ENST00000485093 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
TM9SF3-205ENST00000485093 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
TM9SF3-205ENST00000485093 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
TM9SF3-205ENST00000485093 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
TM9SF3-205ENST00000485093 RNF39Q9H2S5 420 aa13.82□□□□□ -0.2
TM9SF3-205ENST00000485093 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
TM9SF3-205ENST00000485093 KCNA4P22459 653 aa13.68□□□□□ -0.22
TM9SF3-205ENST00000485093 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
TM9SF3-205ENST00000485093 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
TM9SF3-205ENST00000485093 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
TM9SF3-205ENST00000485093 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
TM9SF3-205ENST00000485093 POTEHQ6S545 545 aa13.43□□□□□ -0.26
TM9SF3-205ENST00000485093 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
TM9SF3-205ENST00000485093 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
TM9SF3-205ENST00000485093 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
TM9SF3-205ENST00000485093 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
TM9SF3-205ENST00000485093 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
TM9SF3-205ENST00000485093 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
TM9SF3-205ENST00000485093 ZBTB22O15209 634 aa12.67□□□□□ -0.38
TM9SF3-205ENST00000485093 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
TM9SF3-205ENST00000485093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
TM9SF3-205ENST00000485093 DSG3P32926 999 aa12.63□□□□□ -0.39
TM9SF3-205ENST00000485093 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
TM9SF3-205ENST00000485093 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
TM9SF3-205ENST00000485093 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
TM9SF3-205ENST00000485093 CAPN15O75808 1086 aa12.41□□□□□ -0.42
TM9SF3-205ENST00000485093 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
TM9SF3-205ENST00000485093 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
TM9SF3-205ENST00000485093 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
TM9SF3-205ENST00000485093 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
TM9SF3-205ENST00000485093 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
TM9SF3-205ENST00000485093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.1□□□□□ -0.47
TM9SF3-205ENST00000485093 HNRNPUL2Q1KMD3 747 aaKnown RBP12.1□□□□□ -0.47
TM9SF3-205ENST00000485093 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
TM9SF3-205ENST00000485093 ABCB7O75027 752 aa12.06□□□□□ -0.48
TM9SF3-205ENST00000485093 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
TM9SF3-205ENST00000485093 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
TM9SF3-205ENST00000485093 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
TM9SF3-205ENST00000485093 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
TM9SF3-205ENST00000485093 APLP2Q06481 763 aa11.9□□□□□ -0.5
TM9SF3-205ENST00000485093 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
TM9SF3-205ENST00000485093 POLA2Q14181 598 aa11.64□□□□□ -0.55
TM9SF3-205ENST00000485093 HAX1O00165 279 aa11.62□□□□□ -0.55
TM9SF3-205ENST00000485093 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
TM9SF3-205ENST00000485093 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
TM9SF3-205ENST00000485093 EVX2Q03828 476 aa11.49□□□□□ -0.57
TM9SF3-205ENST00000485093 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
TM9SF3-205ENST00000485093 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
TM9SF3-205ENST00000485093 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
TM9SF3-205ENST00000485093 LHX8Q68G74 356 aa11.39□□□□□ -0.59
TM9SF3-205ENST00000485093 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
TM9SF3-205ENST00000485093 FBLN2P98095 1184 aa11.35□□□□□ -0.59
TM9SF3-205ENST00000485093 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
TM9SF3-205ENST00000485093 PROM2Q8N271 834 aa11.27□□□□□ -0.61
TM9SF3-205ENST00000485093 FKBP8Q14318 412 aa11.26□□□□□ -0.61
TM9SF3-205ENST00000485093 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
TM9SF3-205ENST00000485093 OSCARQ8IYS5 282 aa11.2□□□□□ -0.62
TM9SF3-205ENST00000485093 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
TM9SF3-205ENST00000485093 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
TM9SF3-205ENST00000485093 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
TM9SF3-205ENST00000485093 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
TM9SF3-205ENST00000485093 GABBR2O75899 941 aa11.16□□□□□ -0.62
TM9SF3-205ENST00000485093 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
TM9SF3-205ENST00000485093 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
TM9SF3-205ENST00000485093 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
TM9SF3-205ENST00000485093 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
TM9SF3-205ENST00000485093 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
TM9SF3-205ENST00000485093 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
TM9SF3-205ENST00000485093 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
TM9SF3-205ENST00000485093 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
TM9SF3-205ENST00000485093 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
TM9SF3-205ENST00000485093 POTEMA6NI47 508 aa10.78□□□□□ -0.68
TM9SF3-205ENST00000485093 VASPP50552 380 aaPredicted RBP10.74□□□□□ -0.69
TM9SF3-205ENST00000485093 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
TM9SF3-205ENST00000485093 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
TM9SF3-205ENST00000485093 CLCN6P51797 869 aa10.7□□□□□ -0.7
TM9SF3-205ENST00000485093 OTUD5Q96G74 571 aa10.7□□□□□ -0.7
TM9SF3-205ENST00000485093 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
TM9SF3-205ENST00000485093 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
TM9SF3-205ENST00000485093 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
TM9SF3-205ENST00000485093 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
TM9SF3-205ENST00000485093 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
TM9SF3-205ENST00000485093 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
TM9SF3-205ENST00000485093 PRR29P0C7W0 189 aa10.6□□□□□ -0.71
TM9SF3-205ENST00000485093 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
TM9SF3-205ENST00000485093 MIER1Q8N108 512 aa10.56□□□□□ -0.72
TM9SF3-205ENST00000485093 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
TM9SF3-205ENST00000485093 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
TM9SF3-205ENST00000485093 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms