RNA–Protein interactions for RNA: ENST00000464624.6

GNAS-222, Transcript of GNAS complex locus, humanhuman

TSL 5

Gene GNAS, Length 3,764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-222ENST00000464624 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
GNAS-222ENST00000464624 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
GNAS-222ENST00000464624 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
GNAS-222ENST00000464624 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.39
GNAS-222ENST00000464624 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
GNAS-222ENST00000464624 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
GNAS-222ENST00000464624 HRCP23327 699 aa22.7■■□□□ 1.22
GNAS-222ENST00000464624 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
GNAS-222ENST00000464624 EHMT2Q96KQ7 1210 aa22.59■■□□□ 1.21
GNAS-222ENST00000464624 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
GNAS-222ENST00000464624 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
GNAS-222ENST00000464624 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
GNAS-222ENST00000464624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
GNAS-222ENST00000464624 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
GNAS-222ENST00000464624 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
GNAS-222ENST00000464624 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
GNAS-222ENST00000464624 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
GNAS-222ENST00000464624 CCDC180Q9P1Z9 1646 aa21.71■■□□□ 1.07
GNAS-222ENST00000464624 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
GNAS-222ENST00000464624 CCER1Q8TC90 406 aaPredicted RBP21.58■■□□□ 1.04
GNAS-222ENST00000464624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
GNAS-222ENST00000464624 SCRIBQ14160 1630 aa21.31■■□□□ 1
GNAS-222ENST00000464624 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
GNAS-222ENST00000464624 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
GNAS-222ENST00000464624 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
GNAS-222ENST00000464624 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
GNAS-222ENST00000464624 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
GNAS-222ENST00000464624 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
GNAS-222ENST00000464624 CENPBP07199 599 aaPredicted RBP21.14■□□□□ 0.98
GNAS-222ENST00000464624 ABCC9O60706 1549 aa21.11■□□□□ 0.97
GNAS-222ENST00000464624 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
GNAS-222ENST00000464624 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
GNAS-222ENST00000464624 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
GNAS-222ENST00000464624 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
GNAS-222ENST00000464624 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
GNAS-222ENST00000464624 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
GNAS-222ENST00000464624 APLP2Q06481 763 aa20.93■□□□□ 0.94
GNAS-222ENST00000464624 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
GNAS-222ENST00000464624 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
GNAS-222ENST00000464624 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.91e-59■■□□□ 11.4
GNAS-222ENST00000464624 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
GNAS-222ENST00000464624 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
GNAS-222ENST00000464624 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
GNAS-222ENST00000464624 WIZO95785 1651 aa20.55■□□□□ 0.88
GNAS-222ENST00000464624 ITGAEP38570 1179 aa20.54■□□□□ 0.88
GNAS-222ENST00000464624 MIER1Q8N108 512 aa20.51■□□□□ 0.87
GNAS-222ENST00000464624 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
GNAS-222ENST00000464624 SOGA1O94964 1423 aa20.49■□□□□ 0.87
GNAS-222ENST00000464624 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
GNAS-222ENST00000464624 NACADO15069 1562 aa20.37■□□□□ 0.85
GNAS-222ENST00000464624 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
GNAS-222ENST00000464624 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
GNAS-222ENST00000464624 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
GNAS-222ENST00000464624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.84
GNAS-222ENST00000464624 MYT1Q01538 1121 aa20.23■□□□□ 0.83
GNAS-222ENST00000464624 CLIP1P30622 1438 aa20.22■□□□□ 0.83
GNAS-222ENST00000464624 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
GNAS-222ENST00000464624 BCANQ96GW7 911 aa20.17■□□□□ 0.82
GNAS-222ENST00000464624 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.824e-6■■□□□ 11.4
GNAS-222ENST00000464624 EEA1Q15075 1411 aa20.11■□□□□ 0.81
GNAS-222ENST00000464624 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
GNAS-222ENST00000464624 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
GNAS-222ENST00000464624 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
GNAS-222ENST00000464624 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
GNAS-222ENST00000464624 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
GNAS-222ENST00000464624 NEFLP07196 543 aa19.95■□□□□ 0.78
GNAS-222ENST00000464624 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
GNAS-222ENST00000464624 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
GNAS-222ENST00000464624 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
GNAS-222ENST00000464624 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
GNAS-222ENST00000464624 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
GNAS-222ENST00000464624 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
GNAS-222ENST00000464624 SUPT16HQ9Y5B9 1047 aaKnown RBP19.87■□□□□ 0.77
GNAS-222ENST00000464624 FKBP8Q14318 412 aa19.83■□□□□ 0.76
GNAS-222ENST00000464624 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
GNAS-222ENST00000464624 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
GNAS-222ENST00000464624 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
GNAS-222ENST00000464624 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
GNAS-222ENST00000464624 CNGB1Q14028 1251 aaPredicted RBP19.74■□□□□ 0.75
GNAS-222ENST00000464624 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
GNAS-222ENST00000464624 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
GNAS-222ENST00000464624 ANP32CO43423 234 aa19.69■□□□□ 0.74
GNAS-222ENST00000464624 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
GNAS-222ENST00000464624 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
GNAS-222ENST00000464624 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
GNAS-222ENST00000464624 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
GNAS-222ENST00000464624 KIF21BO75037 1637 aa19.62■□□□□ 0.73
GNAS-222ENST00000464624 TSHZ2Q9NRE2 1034 aa19.6■□□□□ 0.73
GNAS-222ENST00000464624 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
GNAS-222ENST00000464624 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
GNAS-222ENST00000464624 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
GNAS-222ENST00000464624 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
GNAS-222ENST00000464624 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
GNAS-222ENST00000464624 ARID3CA6NKF2 412 aa19.52■□□□□ 0.72
GNAS-222ENST00000464624 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.712e-8■□□□□ 8.8
GNAS-222ENST00000464624 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
GNAS-222ENST00000464624 ANP32EQ9BTT0 268 aa19.47■□□□□ 0.71
GNAS-222ENST00000464624 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
GNAS-222ENST00000464624 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
GNAS-222ENST00000464624 CUX2O14529 1486 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms