RNA–Protein interactions for RNA: ENST00000528648.1

BANF1-206, Transcript of barrier to autointegration factor 1, humanhuman

TSL 3

Gene BANF1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BANF1-206ENST00000528648 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
BANF1-206ENST00000528648 ABCC9O60706 1549 aa22.11■■□□□ 1.13
BANF1-206ENST00000528648 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
BANF1-206ENST00000528648 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
BANF1-206ENST00000528648 RB1CC1Q8TDY2 1594 aa20.7■□□□□ 0.9
BANF1-206ENST00000528648 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
BANF1-206ENST00000528648 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
BANF1-206ENST00000528648 NACADO15069 1562 aa20.38■□□□□ 0.85
BANF1-206ENST00000528648 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
BANF1-206ENST00000528648 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
BANF1-206ENST00000528648 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
BANF1-206ENST00000528648 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
BANF1-206ENST00000528648 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
BANF1-206ENST00000528648 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
BANF1-206ENST00000528648 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
BANF1-206ENST00000528648 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
BANF1-206ENST00000528648 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
BANF1-206ENST00000528648 CUX2O14529 1486 aa19.38■□□□□ 0.69
BANF1-206ENST00000528648 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
BANF1-206ENST00000528648 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
BANF1-206ENST00000528648 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
BANF1-206ENST00000528648 TRIM41Q8WV44 630 aa19■□□□□ 0.63
BANF1-206ENST00000528648 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
BANF1-206ENST00000528648 NESP48681 1621 aa18.82■□□□□ 0.6
BANF1-206ENST00000528648 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
BANF1-206ENST00000528648 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
BANF1-206ENST00000528648 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
BANF1-206ENST00000528648 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
BANF1-206ENST00000528648 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
BANF1-206ENST00000528648 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
BANF1-206ENST00000528648 SMARCA4P51532 1647 aa18.47■□□□□ 0.55
BANF1-206ENST00000528648 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
BANF1-206ENST00000528648 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
BANF1-206ENST00000528648 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
BANF1-206ENST00000528648 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
BANF1-206ENST00000528648 WDR62O43379 1518 aa18.33■□□□□ 0.53
BANF1-206ENST00000528648 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
BANF1-206ENST00000528648 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
BANF1-206ENST00000528648 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
BANF1-206ENST00000528648 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
BANF1-206ENST00000528648 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
BANF1-206ENST00000528648 CADPSQ9ULU8 1353 aa18.21■□□□□ 0.51
BANF1-206ENST00000528648 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
BANF1-206ENST00000528648 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
BANF1-206ENST00000528648 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
BANF1-206ENST00000528648 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
BANF1-206ENST00000528648 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
BANF1-206ENST00000528648 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
BANF1-206ENST00000528648 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
BANF1-206ENST00000528648 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
BANF1-206ENST00000528648 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
BANF1-206ENST00000528648 CFTRP13569 1480 aa17.86■□□□□ 0.45
BANF1-206ENST00000528648 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
BANF1-206ENST00000528648 WIZO95785 1651 aa17.83■□□□□ 0.45
BANF1-206ENST00000528648 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
BANF1-206ENST00000528648 CHD1O14646 1710 aa17.75■□□□□ 0.43
BANF1-206ENST00000528648 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
BANF1-206ENST00000528648 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
BANF1-206ENST00000528648 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
BANF1-206ENST00000528648 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
BANF1-206ENST00000528648 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.43e-6■■■■□ 23.7
BANF1-206ENST00000528648 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
BANF1-206ENST00000528648 FBLN2P98095 1184 aa17.52■□□□□ 0.4
BANF1-206ENST00000528648 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.39
BANF1-206ENST00000528648 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
BANF1-206ENST00000528648 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
BANF1-206ENST00000528648 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
BANF1-206ENST00000528648 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
BANF1-206ENST00000528648 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
BANF1-206ENST00000528648 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
BANF1-206ENST00000528648 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
BANF1-206ENST00000528648 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
BANF1-206ENST00000528648 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
BANF1-206ENST00000528648 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
BANF1-206ENST00000528648 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
BANF1-206ENST00000528648 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
BANF1-206ENST00000528648 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
BANF1-206ENST00000528648 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
BANF1-206ENST00000528648 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
BANF1-206ENST00000528648 SOGA1O94964 1423 aa17.24■□□□□ 0.35
BANF1-206ENST00000528648 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
BANF1-206ENST00000528648 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
BANF1-206ENST00000528648 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
BANF1-206ENST00000528648 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
BANF1-206ENST00000528648 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
BANF1-206ENST00000528648 PBRM1Q86U86 1689 aa17.12■□□□□ 0.33
BANF1-206ENST00000528648 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
BANF1-206ENST00000528648 SHROOM2Q13796 1616 aa17.02■□□□□ 0.31
BANF1-206ENST00000528648 CUX1P39880 1505 aa17.01■□□□□ 0.31
BANF1-206ENST00000528648 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
BANF1-206ENST00000528648 KDM6BO15054 1643 aa16.97■□□□□ 0.31
BANF1-206ENST00000528648 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
BANF1-206ENST00000528648 FAM69CQ0P6D2 419 aa16.97■□□□□ 0.31
BANF1-206ENST00000528648 GRIN2AQ12879 1464 aa16.97■□□□□ 0.31
BANF1-206ENST00000528648 NUP160Q12769 1436 aa16.96■□□□□ 0.31
BANF1-206ENST00000528648 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
BANF1-206ENST00000528648 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
BANF1-206ENST00000528648 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
BANF1-206ENST00000528648 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
BANF1-206ENST00000528648 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms