RNA–Protein interactions for RNA: ENST00000494081.5

GNAS-254, Transcript of GNAS complex locus, humanhuman

TSL 5

Gene GNAS, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-254ENST00000494081 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
GNAS-254ENST00000494081 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
GNAS-254ENST00000494081 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
GNAS-254ENST00000494081 PHF23Q9BUL5 403 aaPredicted RBP16.48■□□□□ 0.23
GNAS-254ENST00000494081 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
GNAS-254ENST00000494081 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
GNAS-254ENST00000494081 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
GNAS-254ENST00000494081 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
GNAS-254ENST00000494081 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
GNAS-254ENST00000494081 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
GNAS-254ENST00000494081 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
GNAS-254ENST00000494081 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
GNAS-254ENST00000494081 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
GNAS-254ENST00000494081 NACADO15069 1562 aa15.02■□□□□ -0
GNAS-254ENST00000494081 ABCC9O60706 1549 aa14.87□□□□□ -0.03
GNAS-254ENST00000494081 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
GNAS-254ENST00000494081 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
GNAS-254ENST00000494081 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
GNAS-254ENST00000494081 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
GNAS-254ENST00000494081 FOXD1Q16676 465 aa14.52□□□□□ -0.09
GNAS-254ENST00000494081 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
GNAS-254ENST00000494081 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
GNAS-254ENST00000494081 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
GNAS-254ENST00000494081 WIZO95785 1651 aa14.36□□□□□ -0.11
GNAS-254ENST00000494081 ADRA2BP18089 450 aa14.33□□□□□ -0.12
GNAS-254ENST00000494081 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
GNAS-254ENST00000494081 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
GNAS-254ENST00000494081 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
GNAS-254ENST00000494081 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
GNAS-254ENST00000494081 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
GNAS-254ENST00000494081 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
GNAS-254ENST00000494081 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
GNAS-254ENST00000494081 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
GNAS-254ENST00000494081 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
GNAS-254ENST00000494081 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
GNAS-254ENST00000494081 DNAJC5BQ9UF47 199 aa14.14□□□□□ -0.15
GNAS-254ENST00000494081 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
GNAS-254ENST00000494081 HRCP23327 699 aa14.06□□□□□ -0.16
GNAS-254ENST00000494081 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
GNAS-254ENST00000494081 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
GNAS-254ENST00000494081 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
GNAS-254ENST00000494081 FAM9AQ8IZU1 332 aaPredicted RBP14.01□□□□□ -0.17
GNAS-254ENST00000494081 EEA1Q15075 1411 aa13.98□□□□□ -0.17
GNAS-254ENST00000494081 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
GNAS-254ENST00000494081 KCNA4P22459 653 aa13.91□□□□□ -0.18
GNAS-254ENST00000494081 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
GNAS-254ENST00000494081 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
GNAS-254ENST00000494081 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
GNAS-254ENST00000494081 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
GNAS-254ENST00000494081 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
GNAS-254ENST00000494081 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
GNAS-254ENST00000494081 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.19
GNAS-254ENST00000494081 SOGA1O94964 1423 aa13.81□□□□□ -0.2
GNAS-254ENST00000494081 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
GNAS-254ENST00000494081 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
GNAS-254ENST00000494081 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
GNAS-254ENST00000494081 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
GNAS-254ENST00000494081 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
GNAS-254ENST00000494081 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
GNAS-254ENST00000494081 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
GNAS-254ENST00000494081 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
GNAS-254ENST00000494081 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
GNAS-254ENST00000494081 UBTFP17480 764 aaKnown RBP13.68□□□□□ -0.22
GNAS-254ENST00000494081 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
GNAS-254ENST00000494081 CFTRP13569 1480 aa13.67□□□□□ -0.22
GNAS-254ENST00000494081 KIF21BO75037 1637 aa13.67□□□□□ -0.22
GNAS-254ENST00000494081 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
GNAS-254ENST00000494081 DNAJC5Q9H3Z4 198 aa13.61□□□□□ -0.23
GNAS-254ENST00000494081 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
GNAS-254ENST00000494081 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
GNAS-254ENST00000494081 CUX1P39880 1505 aa13.53□□□□□ -0.24
GNAS-254ENST00000494081 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
GNAS-254ENST00000494081 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
GNAS-254ENST00000494081 CLIP1P30622 1438 aa13.52□□□□□ -0.25
GNAS-254ENST00000494081 KIF27Q86VH2 1401 aa13.52□□□□□ -0.25
GNAS-254ENST00000494081 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
GNAS-254ENST00000494081 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
GNAS-254ENST00000494081 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
GNAS-254ENST00000494081 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
GNAS-254ENST00000494081 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
GNAS-254ENST00000494081 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
GNAS-254ENST00000494081 APLP2Q06481 763 aa13.43□□□□□ -0.26
GNAS-254ENST00000494081 MSH5O43196 834 aa13.39□□□□□ -0.27
GNAS-254ENST00000494081 IGF1RP08069 1367 aa13.39□□□□□ -0.27
GNAS-254ENST00000494081 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
GNAS-254ENST00000494081 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
GNAS-254ENST00000494081 CUX2O14529 1486 aa13.33□□□□□ -0.28
GNAS-254ENST00000494081 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
GNAS-254ENST00000494081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
GNAS-254ENST00000494081 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
GNAS-254ENST00000494081 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
GNAS-254ENST00000494081 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
GNAS-254ENST00000494081 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
GNAS-254ENST00000494081 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
GNAS-254ENST00000494081 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
GNAS-254ENST00000494081 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
GNAS-254ENST00000494081 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
GNAS-254ENST00000494081 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
GNAS-254ENST00000494081 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
GNAS-254ENST00000494081 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms