RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
TMC6-212ENST00000589553 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
TMC6-212ENST00000589553 SHROOM4Q9ULL8 1493 aa37.44■■■■□ 3.58
TMC6-212ENST00000589553 ZCCHC6Q5VYS8 1495 aaKnown RBP37.24■■■■□ 3.55
TMC6-212ENST00000589553 SUPT5HO00267 1087 aaKnown RBP36.62■■■■□ 3.45
TMC6-212ENST00000589553 DCAF8L2P0C7V8 631 aa36.49■■■■□ 3.43
TMC6-212ENST00000589553 DCAF1Q9Y4B6 1507 aa36.12■■■■□ 3.37
TMC6-212ENST00000589553 CHIC1Q5VXU3 224 aa35.54■■■■□ 3.28
TMC6-212ENST00000589553 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
TMC6-212ENST00000589553 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
TMC6-212ENST00000589553 ABCC9O60706 1549 aa35.13■■■■□ 3.21
TMC6-212ENST00000589553 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
TMC6-212ENST00000589553 NACADO15069 1562 aa34.7■■■■□ 3.15
TMC6-212ENST00000589553 LOC105371045A0A1W2PR82 267 aa34.49■■■■□ 3.11
TMC6-212ENST00000589553 RB1CC1Q8TDY2 1594 aa34.46■■■■□ 3.11
TMC6-212ENST00000589553 CECR2Q9BXF3 1484 aa34.39■■■■□ 3.1
TMC6-212ENST00000589553 PCGF6Q9BYE7 350 aa34.28■■■■□ 3.08
TMC6-212ENST00000589553 MROH2BQ7Z745 1585 aa34.25■■■■□ 3.07
TMC6-212ENST00000589553 HRCP23327 699 aa34.18■■■■□ 3.06
TMC6-212ENST00000589553 TRIM41Q8WV44 630 aa34.1■■■■□ 3.05
TMC6-212ENST00000589553 WIZO95785 1651 aa34.08■■■■□ 3.05
TMC6-212ENST00000589553 FAM9AQ8IZU1 332 aaPredicted RBP33.84■■■■□ 3.01
TMC6-212ENST00000589553 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
TMC6-212ENST00000589553 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
TMC6-212ENST00000589553 TRIM26Q12899 539 aaPredicted RBP33.64■■■□□ 2.98
TMC6-212ENST00000589553 SMARCA4P51532 1647 aa33.59■■■□□ 2.97
TMC6-212ENST00000589553 EIF4G1Q04637 1599 aaKnown RBP33.58■■■□□ 2.97
TMC6-212ENST00000589553 EHMT2Q96KQ7 1210 aa33.57■■■□□ 2.97
TMC6-212ENST00000589553 PPARGC1BQ86YN6 1023 aaKnown RBP33.55■■■□□ 2.96
TMC6-212ENST00000589553 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
TMC6-212ENST00000589553 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
TMC6-212ENST00000589553 SMARCA2P51531 1590 aa33.35■■■□□ 2.93
TMC6-212ENST00000589553 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.921e-10■□□□□ 9.7
TMC6-212ENST00000589553 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
TMC6-212ENST00000589553 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
TMC6-212ENST00000589553 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
TMC6-212ENST00000589553 SOGA1O94964 1423 aa32.9■■■□□ 2.86
TMC6-212ENST00000589553 ZEB1P37275 1124 aaPredicted RBP32.79■■■□□ 2.84
TMC6-212ENST00000589553 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
TMC6-212ENST00000589553 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
TMC6-212ENST00000589553 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
TMC6-212ENST00000589553 CEP162Q5TB80 1403 aa32.68■■■□□ 2.82
TMC6-212ENST00000589553 EEA1Q15075 1411 aa32.66■■■□□ 2.82
TMC6-212ENST00000589553 CSRNP3Q8WYN3 585 aa32.65■■■□□ 2.82
TMC6-212ENST00000589553 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
TMC6-212ENST00000589553 TNIKQ9UKE5 1360 aa32.61■■■□□ 2.81
TMC6-212ENST00000589553 SYNJ1O43426 1573 aa32.58■■■□□ 2.81
TMC6-212ENST00000589553 UBTFP17480 764 aaKnown RBP32.5■■■□□ 2.79
TMC6-212ENST00000589553 TTBK1Q5TCY1 1321 aaPredicted RBP32.47■■■□□ 2.79
TMC6-212ENST00000589553 GOLGA3Q08378 1498 aa32.46■■■□□ 2.79
TMC6-212ENST00000589553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.37■■■□□ 2.77
TMC6-212ENST00000589553 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
TMC6-212ENST00000589553 KIF21BO75037 1637 aa32.28■■■□□ 2.76
TMC6-212ENST00000589553 CCER1Q8TC90 406 aaPredicted RBP32.24■■■□□ 2.75
TMC6-212ENST00000589553 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
TMC6-212ENST00000589553 RAPGEF2Q9Y4G8 1499 aa32.11■■■□□ 2.73
TMC6-212ENST00000589553 HMGXB3Q12766 1538 aa32.11■■■□□ 2.73
TMC6-212ENST00000589553 NCAPD3P42695 1498 aa32.11■■■□□ 2.73
TMC6-212ENST00000589553 CLIP1P30622 1438 aa32.09■■■□□ 2.73
TMC6-212ENST00000589553 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
TMC6-212ENST00000589553 VPS8Q8N3P4 1428 aa31.93■■■□□ 2.7
TMC6-212ENST00000589553 RANGAP1P46060 587 aaPredicted RBP31.92■■■□□ 2.7
TMC6-212ENST00000589553 CUX1P39880 1505 aa31.9■■■□□ 2.7
TMC6-212ENST00000589553 CFTRP13569 1480 aa31.82■■■□□ 2.69
TMC6-212ENST00000589553 PRXQ9BXM0 1461 aa31.8■■■□□ 2.68
TMC6-212ENST00000589553 ERICH3Q5RHP9 1530 aa31.77■■■□□ 2.68
TMC6-212ENST00000589553 HNRNPUL2Q1KMD3 747 aaKnown RBP31.72■■■□□ 2.67
TMC6-212ENST00000589553 APLP2Q06481 763 aa31.7■■■□□ 2.67
TMC6-212ENST00000589553 KIF27Q86VH2 1401 aa31.67■■■□□ 2.66
TMC6-212ENST00000589553 ARAP1Q96P48 1450 aa31.63■■■□□ 2.65
TMC6-212ENST00000589553 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
TMC6-212ENST00000589553 DIEXFQ68CQ4 756 aaKnown RBP31.51■■■□□ 2.64
TMC6-212ENST00000589553 CADPSQ9ULU8 1353 aa31.48■■■□□ 2.63
TMC6-212ENST00000589553 CUX2O14529 1486 aa31.43■■■□□ 2.62
TMC6-212ENST00000589553 SCAF1Q9H7N4 1312 aaKnown RBP31.41■■■□□ 2.62
TMC6-212ENST00000589553 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
TMC6-212ENST00000589553 KANK4Q5T7N3 995 aaPredicted RBP31.41■■■□□ 2.62
TMC6-212ENST00000589553 ARHGAP35Q9NRY4 1499 aa31.37■■■□□ 2.61
TMC6-212ENST00000589553 FGD5Q6ZNL6 1462 aa31.35■■■□□ 2.61
TMC6-212ENST00000589553 IGF1RP08069 1367 aa31.35■■■□□ 2.61
TMC6-212ENST00000589553 ZNF316A6NFI3 1004 aaPredicted RBP31.33■■■□□ 2.61
TMC6-212ENST00000589553 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.59
TMC6-212ENST00000589553 CARMIL1Q5VZK9 1371 aa31.2■■■□□ 2.59
TMC6-212ENST00000589553 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
TMC6-212ENST00000589553 NEUROD1Q13562 356 aa31.16■■■□□ 2.58
TMC6-212ENST00000589553 ACIN1Q9UKV3 1341 aaKnown RBP31.15■■■□□ 2.58
TMC6-212ENST00000589553 DHX57Q6P158 1386 aaKnown RBP31.1■■■□□ 2.57
TMC6-212ENST00000589553 NESP48681 1621 aa31.06■■■□□ 2.56
TMC6-212ENST00000589553 RAD54L2Q9Y4B4 1467 aa31.05■■■□□ 2.56
TMC6-212ENST00000589553 DNMBPQ6XZF7 1577 aa31.04■■■□□ 2.56
TMC6-212ENST00000589553 CCNB3Q8WWL7 1395 aa31.04■■■□□ 2.56
TMC6-212ENST00000589553 TOPBP1Q92547 1522 aa31■■■□□ 2.55
TMC6-212ENST00000589553 TIAM1Q13009 1591 aa31■■■□□ 2.55
TMC6-212ENST00000589553 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
TMC6-212ENST00000589553 CLSPNQ9HAW4 1339 aa30.96■■■□□ 2.55
TMC6-212ENST00000589553 CENPBP07199 599 aaPredicted RBP30.96■■■□□ 2.55
TMC6-212ENST00000589553 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
TMC6-212ENST00000589553 ITGAEP38570 1179 aa30.94■■■□□ 2.54
TMC6-212ENST00000589553 MAP3K1Q13233 1512 aa30.92■■■□□ 2.54
TMC6-212ENST00000589553 P3H3Q8IVL6 736 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms