Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ATP1B3-204ENST00000466678 1708 ntTSL 311.65□□□□□ -0.547e-10■□□□□ 10
SRSF1Q07955 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.43□□□□□ -1.387e-10■□□□□ 10
SRSF1Q07955 ATP1B3-203ENST00000465172 1951 ntTSL 26.41□□□□□ -1.387e-10■□□□□ 10
SRSF1Q07955 ATP1B3-206ENST00000482635 569 ntTSL 55.34□□□□□ -1.557e-10■□□□□ 10
SRSF1Q07955 ATP1B3-209ENST00000487199 421 ntTSL 33.09□□□□□ -1.917e-10■□□□□ 10
SRSF1Q07955 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.032e-8■□□□□ 10
SRSF1Q07955 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.12e-8■□□□□ 10
SRSF1Q07955 NINL-202ENST00000336104 439 ntTSL 312.33□□□□□ -0.441e-6■□□□□ 10
SRSF1Q07955 EML4-204ENST00000406175 4622 ntTSL 1 (best)4.87□□□□□ -1.632e-8■□□□□ 10
SRSF1Q07955 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.935e-7■□□□□ 9.9
SRSF1Q07955 ENOSF1-210ENST00000581332 451 ntTSL 419.5■□□□□ 0.711e-9■□□□□ 9.9
SRSF1Q07955 TFR2-208ENST00000473571 628 ntTSL 317.62■□□□□ 0.412e-7■□□□□ 9.9
SRSF1Q07955 TFR2-211ENST00000475011 610 ntTSL 216.48■□□□□ 0.232e-7■□□□□ 9.9
SRSF1Q07955 WDR6-212ENST00000472878 556 ntTSL 515.9■□□□□ 0.143e-8■□□□□ 9.9
SRSF1Q07955 WDR6-215ENST00000489427 564 ntTSL 415.04■□□□□ -03e-8■□□□□ 9.9
SRSF1Q07955 WDR6-209ENST00000461687 555 ntTSL 414.77□□□□□ -0.053e-8■□□□□ 9.9
SRSF1Q07955 RBCK1-208ENST00000414880 765 ntTSL 313.44□□□□□ -0.267e-11■□□□□ 9.9
SRSF1Q07955 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.65□□□□□ -1.342e-7■□□□□ 9.9
SRSF1Q07955 LUC7L2-205ENST00000463912 2382 ntTSL 25.35□□□□□ -1.552e-7■□□□□ 9.9
SRSF1Q07955 LUC7L2-207ENST00000498518 2837 ntTSL 23.43□□□□□ -1.862e-7■□□□□ 9.9
SRSF1Q07955 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.836e-7■□□□□ 9.9
SRSF1Q07955 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.156e-7■□□□□ 9.9
SRSF1Q07955 ANKRD10-209ENST00000489973 745 ntTSL 38.27□□□□□ -1.096e-7■□□□□ 9.9
SRSF1Q07955 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC8.78□□□□□ -13e-9■□□□□ 9.9
SRSF1Q07955 AP1G2-225ENST00000556743 1456 ntTSL 1 (best)14.53□□□□□ -0.084e-8■□□□□ 9.9
SRSF1Q07955 AP1G2-223ENST00000556277 891 ntTSL 514.35□□□□□ -0.114e-8■□□□□ 9.9
SRSF1Q07955 AP1G2-206ENST00000553629 1301 ntTSL 1 (best)14.21□□□□□ -0.134e-8■□□□□ 9.9
SRSF1Q07955 AP1G2-227ENST00000556943 747 ntTSL 311.76□□□□□ -0.534e-8■□□□□ 9.9
SRSF1Q07955 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)18.89■□□□□ 0.618e-7■□□□□ 9.9
SRSF1Q07955 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.56■□□□□ 0.562e-7■□□□□ 9.9
SRSF1Q07955 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.372e-7■□□□□ 9.9
SRSF1Q07955 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.58■□□□□ 0.242e-7■□□□□ 9.9
SRSF1Q07955 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.19■□□□□ 0.182e-7■□□□□ 9.9
SRSF1Q07955 JPT1-201ENST00000304834 1633 ntTSL 1 (best)15.22■□□□□ 0.032e-7■□□□□ 9.9
SRSF1Q07955 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.67□□□□□ -0.062e-7■□□□□ 9.9
SRSF1Q07955 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.082e-7■□□□□ 9.9
SRSF1Q07955 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.34□□□□□ -0.112e-7■□□□□ 9.9
SRSF1Q07955 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-7■□□□□ 9.9
SRSF1Q07955 SERF2-208ENST00000409617 700 ntTSL 213.39□□□□□ -0.272e-7■□□□□ 9.9
SRSF1Q07955 SERF2-211ENST00000430901 483 ntTSL 413.25□□□□□ -0.292e-7■□□□□ 9.9
SRSF1Q07955 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.02□□□□□ -0.332e-7■□□□□ 9.9
SRSF1Q07955 JPT1-210ENST00000580380 411 ntTSL 512.92□□□□□ -0.342e-7■□□□□ 9.9
SRSF1Q07955 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.91□□□□□ -0.342e-7■□□□□ 9.9
SRSF1Q07955 JPT1-205ENST00000470924 663 ntTSL 5 BASIC12.25□□□□□ -0.452e-7■□□□□ 9.9
SRSF1Q07955 SERF2-205ENST00000403425 690 ntTSL 2 BASIC11.84□□□□□ -0.512e-7■□□□□ 9.9
SRSF1Q07955 SERF2-204ENST00000402131 586 ntTSL 2 BASIC11.78□□□□□ -0.522e-7■□□□□ 9.9
SRSF1Q07955 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC11.67□□□□□ -0.542e-7■□□□□ 9.9
SRSF1Q07955 SERF2-216ENST00000486144 1030 ntTSL 211.67□□□□□ -0.542e-7■□□□□ 9.9
SRSF1Q07955 SERF2-212ENST00000445816 2099 ntTSL 311.64□□□□□ -0.552e-7■□□□□ 9.9
SRSF1Q07955 SERF2-202ENST00000339624 506 ntTSL 2 BASIC11.15□□□□□ -0.622e-7■□□□□ 9.9
SRSF1Q07955 JPT1-208ENST00000481647 576 ntTSL 5 BASIC10.77□□□□□ -0.692e-7■□□□□ 9.9
SRSF1Q07955 SERF2-213ENST00000448830 2792 ntTSL 210.11□□□□□ -0.792e-7■□□□□ 9.9
SRSF1Q07955 JPT1-212ENST00000584079 382 ntTSL 58.23□□□□□ -1.092e-7■□□□□ 9.9
SRSF1Q07955 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.78□□□□□ -1.162e-7■□□□□ 9.9
SRSF1Q07955 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.83□□□□□ -0.24e-11■□□□□ 9.9
SRSF1Q07955 RBCK1-209ENST00000415942 2613 ntTSL 513.47□□□□□ -0.254e-11■□□□□ 9.9
SRSF1Q07955 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.37□□□□□ -0.274e-11■□□□□ 9.9
SRSF1Q07955 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.314e-11■□□□□ 9.9
SRSF1Q07955 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.48□□□□□ -0.414e-11■□□□□ 9.9
SRSF1Q07955 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)11.81□□□□□ -0.524e-11■□□□□ 9.9
SRSF1Q07955 HDAC7-227ENST00000548080 1479 ntTSL 515.7■□□□□ 0.19e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-217ENST00000459625 6414 ntTSL 213.34□□□□□ -0.279e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.569e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-219ENST00000470668 4266 ntTSL 211.56□□□□□ -0.569e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-228ENST00000548938 2719 ntTSL 510.58□□□□□ -0.729e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-221ENST00000477203 3122 ntTSL 210.48□□□□□ -0.739e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.769e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.769e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.789e-8■□□□□ 9.9
SRSF1Q07955 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.899e-8■□□□□ 9.9
SRSF1Q07955 PHACTR4-205ENST00000632202 918 ntTSL 514.82□□□□□ -0.042e-9■□□□□ 9.9
SRSF1Q07955 PHACTR4-209ENST00000633371 597 ntTSL 312.32□□□□□ -0.442e-9■□□□□ 9.9
SRSF1Q07955 PHACTR4-203ENST00000463428 1421 ntTSL 1 (best)12.23□□□□□ -0.452e-9■□□□□ 9.9
SRSF1Q07955 PHACTR4-206ENST00000632421 3375 ntTSL 29.34□□□□□ -0.912e-9■□□□□ 9.9
SRSF1Q07955 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.942e-9■□□□□ 9.9
SRSF1Q07955 PHACTR4-204ENST00000493669 3078 ntTSL 1 (best)8.39□□□□□ -1.072e-9■□□□□ 9.9
SRSF1Q07955 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.76■□□□□ 0.112e-6■□□□□ 9.9
SRSF1Q07955 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.79□□□□□ -0.362e-6■□□□□ 9.9
SRSF1Q07955 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.27□□□□□ -0.452e-6■□□□□ 9.9
SRSF1Q07955 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.462e-6■□□□□ 9.9
SRSF1Q07955 HMGN2-205ENST00000466194 952 ntTSL 217.12■□□□□ 0.331e-6■□□□□ 9.9
SRSF1Q07955 HMGN2-209ENST00000493418 1496 ntTSL 25.11□□□□□ -1.591e-6■□□□□ 9.9
SRSF1Q07955 USP36-207ENST00000587010 607 ntTSL 313.65□□□□□ -0.223e-9■□□□□ 9.9
SRSF1Q07955 USP36-221ENST00000592231 2479 ntTSL 210.86□□□□□ -0.673e-9■□□□□ 9.9
SRSF1Q07955 USP36-219ENST00000591052 427 ntTSL 39.94□□□□□ -0.823e-9■□□□□ 9.9
SRSF1Q07955 USP36-208ENST00000587379 606 ntTSL 39.91□□□□□ -0.823e-9■□□□□ 9.9
SRSF1Q07955 USP36-211ENST00000588130 602 ntTSL 28.3□□□□□ -1.083e-9■□□□□ 9.9
SRSF1Q07955 SREBF1-208ENST00000469356 1323 ntTSL 320.29■□□□□ 0.841e-8■□□□□ 9.9
SRSF1Q07955 SREBF1-221ENST00000583080 482 ntTSL 516.25■□□□□ 0.191e-8■□□□□ 9.9
SRSF1Q07955 SREBF1-219ENST00000580540 540 ntTSL 415.57■□□□□ 0.081e-8■□□□□ 9.9
SRSF1Q07955 SREBF1-215ENST00000487401 477 ntTSL 211.93□□□□□ -0.51e-8■□□□□ 9.9
SRSF1Q07955 NFAT5-210ENST00000567990 2855 ntTSL 511.37□□□□□ -0.592e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.762e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)6.64□□□□□ -1.352e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.392e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.42e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.422e-9■□□□□ 9.9
SRSF1Q07955 NFAT5-207ENST00000565301 653 ntTSL 25.93□□□□□ -1.461e-8■□□□□ 9.9
SRSF1Q07955 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.662e-9■□□□□ 9.9
SRSF1Q07955 TRMT11-207ENST00000468097 1009 ntTSL 54.62□□□□□ -1.671e-8■□□□□ 9.9
Retrieved 100 of 14,836 protein–RNA pairs in 257.1 ms