RNA–Protein interactions for RNA: ENST00000382214.7

RBCK1-204, Transcript of RANBP2-type and C3HC4-type zinc finger containing 1, humanhuman

TSL 1 (best)

Gene RBCK1, Length 2,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBCK1-204ENST00000382214 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
RBCK1-204ENST00000382214 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
RBCK1-204ENST00000382214 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
RBCK1-204ENST00000382214 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
RBCK1-204ENST00000382214 CCDC180Q9P1Z9 1646 aa27.73■■■□□ 2.03
RBCK1-204ENST00000382214 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
RBCK1-204ENST00000382214 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
RBCK1-204ENST00000382214 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
RBCK1-204ENST00000382214 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
RBCK1-204ENST00000382214 ABCC9O60706 1549 aa26.36■■□□□ 1.81
RBCK1-204ENST00000382214 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
RBCK1-204ENST00000382214 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
RBCK1-204ENST00000382214 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
RBCK1-204ENST00000382214 PCGF6Q9BYE7 350 aa26.07■■□□□ 1.76
RBCK1-204ENST00000382214 FAM9AQ8IZU1 332 aaPredicted RBP26■■□□□ 1.75
RBCK1-204ENST00000382214 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
RBCK1-204ENST00000382214 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
RBCK1-204ENST00000382214 NACADO15069 1562 aa25.76■■□□□ 1.71
RBCK1-204ENST00000382214 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
RBCK1-204ENST00000382214 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
RBCK1-204ENST00000382214 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
RBCK1-204ENST00000382214 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
RBCK1-204ENST00000382214 HRCP23327 699 aa25.56■■□□□ 1.68
RBCK1-204ENST00000382214 WIZO95785 1651 aa25.46■■□□□ 1.67
RBCK1-204ENST00000382214 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.677e-8■□□□□ 8.8
RBCK1-204ENST00000382214 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
RBCK1-204ENST00000382214 TRIM26Q12899 539 aaPredicted RBP25.13■■□□□ 1.61
RBCK1-204ENST00000382214 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
RBCK1-204ENST00000382214 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
RBCK1-204ENST00000382214 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
RBCK1-204ENST00000382214 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
RBCK1-204ENST00000382214 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
RBCK1-204ENST00000382214 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
RBCK1-204ENST00000382214 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
RBCK1-204ENST00000382214 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
RBCK1-204ENST00000382214 SOGA1O94964 1423 aa24.73■■□□□ 1.55
RBCK1-204ENST00000382214 SMARCA2P51531 1590 aa24.7■■□□□ 1.55
RBCK1-204ENST00000382214 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.55
RBCK1-204ENST00000382214 EIF4G1Q04637 1599 aaKnown RBP24.69■■□□□ 1.54
RBCK1-204ENST00000382214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
RBCK1-204ENST00000382214 UBTFP17480 764 aaKnown RBP24.64■■□□□ 1.53
RBCK1-204ENST00000382214 CSRNP3Q8WYN3 585 aa24.44■■□□□ 1.5
RBCK1-204ENST00000382214 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
RBCK1-204ENST00000382214 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
RBCK1-204ENST00000382214 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
RBCK1-204ENST00000382214 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
RBCK1-204ENST00000382214 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
RBCK1-204ENST00000382214 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
RBCK1-204ENST00000382214 SYNJ1O43426 1573 aa24.27■■□□□ 1.48
RBCK1-204ENST00000382214 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
RBCK1-204ENST00000382214 HNRNPUL2Q1KMD3 747 aaKnown RBP24.17■■□□□ 1.46
RBCK1-204ENST00000382214 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
RBCK1-204ENST00000382214 EEA1Q15075 1411 aa24.07■■□□□ 1.44
RBCK1-204ENST00000382214 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
RBCK1-204ENST00000382214 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
RBCK1-204ENST00000382214 CLIP1P30622 1438 aa23.95■■□□□ 1.42
RBCK1-204ENST00000382214 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
RBCK1-204ENST00000382214 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
RBCK1-204ENST00000382214 APLP2Q06481 763 aa23.85■■□□□ 1.41
RBCK1-204ENST00000382214 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
RBCK1-204ENST00000382214 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
RBCK1-204ENST00000382214 KIF21BO75037 1637 aa23.76■■□□□ 1.39
RBCK1-204ENST00000382214 ITGAEP38570 1179 aa23.75■■□□□ 1.39
RBCK1-204ENST00000382214 KANK4Q5T7N3 995 aaPredicted RBP23.75■■□□□ 1.39
RBCK1-204ENST00000382214 CUX1P39880 1505 aa23.74■■□□□ 1.39
RBCK1-204ENST00000382214 DIEXFQ68CQ4 756 aaKnown RBP23.72■■□□□ 1.39
RBCK1-204ENST00000382214 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
RBCK1-204ENST00000382214 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
RBCK1-204ENST00000382214 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
RBCK1-204ENST00000382214 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
RBCK1-204ENST00000382214 CFTRP13569 1480 aa23.65■■□□□ 1.38
RBCK1-204ENST00000382214 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
RBCK1-204ENST00000382214 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
RBCK1-204ENST00000382214 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
RBCK1-204ENST00000382214 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
RBCK1-204ENST00000382214 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
RBCK1-204ENST00000382214 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
RBCK1-204ENST00000382214 CUX2O14529 1486 aa23.52■■□□□ 1.36
RBCK1-204ENST00000382214 PRXQ9BXM0 1461 aa23.51■■□□□ 1.35
RBCK1-204ENST00000382214 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
RBCK1-204ENST00000382214 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
RBCK1-204ENST00000382214 NESP48681 1621 aa23.46■■□□□ 1.35
RBCK1-204ENST00000382214 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
RBCK1-204ENST00000382214 ZNF316A6NFI3 1004 aaPredicted RBP23.44■■□□□ 1.34
RBCK1-204ENST00000382214 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
RBCK1-204ENST00000382214 IGF1RP08069 1367 aa23.38■■□□□ 1.33
RBCK1-204ENST00000382214 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
RBCK1-204ENST00000382214 RAD54L2Q9Y4B4 1467 aa23.38■■□□□ 1.33
RBCK1-204ENST00000382214 MIER1Q8N108 512 aa23.36■■□□□ 1.33
RBCK1-204ENST00000382214 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
RBCK1-204ENST00000382214 ACIN1Q9UKV3 1341 aaKnown RBP23.32■■□□□ 1.32
RBCK1-204ENST00000382214 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
RBCK1-204ENST00000382214 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
RBCK1-204ENST00000382214 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
RBCK1-204ENST00000382214 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
RBCK1-204ENST00000382214 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
RBCK1-204ENST00000382214 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
RBCK1-204ENST00000382214 ARID3CA6NKF2 412 aa23.2■■□□□ 1.3
RBCK1-204ENST00000382214 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
RBCK1-204ENST00000382214 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms