RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
HDAC7-221ENST00000477203 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
HDAC7-221ENST00000477203 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
HDAC7-221ENST00000477203 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
HDAC7-221ENST00000477203 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
HDAC7-221ENST00000477203 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
HDAC7-221ENST00000477203 ABCC9O60706 1549 aa23.52■■□□□ 1.36
HDAC7-221ENST00000477203 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
HDAC7-221ENST00000477203 SCRIBQ14160 1630 aa23.14■■□□□ 1.3
HDAC7-221ENST00000477203 NACADO15069 1562 aa22.73■■□□□ 1.23
HDAC7-221ENST00000477203 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
HDAC7-221ENST00000477203 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
HDAC7-221ENST00000477203 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
HDAC7-221ENST00000477203 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
HDAC7-221ENST00000477203 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
HDAC7-221ENST00000477203 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
HDAC7-221ENST00000477203 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
HDAC7-221ENST00000477203 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
HDAC7-221ENST00000477203 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
HDAC7-221ENST00000477203 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
HDAC7-221ENST00000477203 WIZO95785 1651 aa22.21■■□□□ 1.15
HDAC7-221ENST00000477203 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
HDAC7-221ENST00000477203 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
HDAC7-221ENST00000477203 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
HDAC7-221ENST00000477203 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
HDAC7-221ENST00000477203 SMARCA4P51532 1647 aa21.89■■□□□ 1.1
HDAC7-221ENST00000477203 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
HDAC7-221ENST00000477203 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
HDAC7-221ENST00000477203 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
HDAC7-221ENST00000477203 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
HDAC7-221ENST00000477203 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
HDAC7-221ENST00000477203 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
HDAC7-221ENST00000477203 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
HDAC7-221ENST00000477203 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
HDAC7-221ENST00000477203 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
HDAC7-221ENST00000477203 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1.01
HDAC7-221ENST00000477203 SOGA1O94964 1423 aa21.33■■□□□ 1
HDAC7-221ENST00000477203 PEG3Q9GZU2 1588 aa21.3■■□□□ 1
HDAC7-221ENST00000477203 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
HDAC7-221ENST00000477203 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
HDAC7-221ENST00000477203 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
HDAC7-221ENST00000477203 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
HDAC7-221ENST00000477203 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
HDAC7-221ENST00000477203 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
HDAC7-221ENST00000477203 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
HDAC7-221ENST00000477203 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
HDAC7-221ENST00000477203 HRCP23327 699 aa21.07■□□□□ 0.96
HDAC7-221ENST00000477203 CC2D2AQ9P2K1 1620 aa20.97■□□□□ 0.95
HDAC7-221ENST00000477203 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
HDAC7-221ENST00000477203 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
HDAC7-221ENST00000477203 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
HDAC7-221ENST00000477203 EEA1Q15075 1411 aa20.82■□□□□ 0.92
HDAC7-221ENST00000477203 CFTRP13569 1480 aa20.81■□□□□ 0.92
HDAC7-221ENST00000477203 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
HDAC7-221ENST00000477203 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
HDAC7-221ENST00000477203 CUX1P39880 1505 aa20.79■□□□□ 0.92
HDAC7-221ENST00000477203 RAPGEF2Q9Y4G8 1499 aa20.78■□□□□ 0.92
HDAC7-221ENST00000477203 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
HDAC7-221ENST00000477203 PELP1Q8IZL8 1130 aaKnown RBP20.77■□□□□ 0.92
HDAC7-221ENST00000477203 TOP2BQ02880 1626 aa20.77■□□□□ 0.91
HDAC7-221ENST00000477203 NESP48681 1621 aa20.76■□□□□ 0.91
HDAC7-221ENST00000477203 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
HDAC7-221ENST00000477203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
HDAC7-221ENST00000477203 CLIP1P30622 1438 aa20.65■□□□□ 0.9
HDAC7-221ENST00000477203 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
HDAC7-221ENST00000477203 CUX2O14529 1486 aa20.6■□□□□ 0.89
HDAC7-221ENST00000477203 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
HDAC7-221ENST00000477203 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
HDAC7-221ENST00000477203 APLP2Q06481 763 aa20.58■□□□□ 0.89
HDAC7-221ENST00000477203 KIF21BO75037 1637 aa20.57■□□□□ 0.88
HDAC7-221ENST00000477203 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
HDAC7-221ENST00000477203 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
HDAC7-221ENST00000477203 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
HDAC7-221ENST00000477203 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
HDAC7-221ENST00000477203 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
HDAC7-221ENST00000477203 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
HDAC7-221ENST00000477203 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
HDAC7-221ENST00000477203 PRXQ9BXM0 1461 aa20.46■□□□□ 0.87
HDAC7-221ENST00000477203 IGF1RP08069 1367 aa20.44■□□□□ 0.86
HDAC7-221ENST00000477203 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
HDAC7-221ENST00000477203 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
HDAC7-221ENST00000477203 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
HDAC7-221ENST00000477203 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
HDAC7-221ENST00000477203 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-221ENST00000477203 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-221ENST00000477203 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
HDAC7-221ENST00000477203 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
HDAC7-221ENST00000477203 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
HDAC7-221ENST00000477203 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
HDAC7-221ENST00000477203 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
HDAC7-221ENST00000477203 ITGAEP38570 1179 aa20.3■□□□□ 0.84
HDAC7-221ENST00000477203 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
HDAC7-221ENST00000477203 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
HDAC7-221ENST00000477203 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
HDAC7-221ENST00000477203 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
HDAC7-221ENST00000477203 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
HDAC7-221ENST00000477203 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
HDAC7-221ENST00000477203 FHOD3Q2V2M9 1422 aa20.12■□□□□ 0.81
HDAC7-221ENST00000477203 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
HDAC7-221ENST00000477203 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.814e-7■■■■■ 29.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms