RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 NISCHQ9Y2I1 1504 aa44.31■■■■■ 4.68
PABPC4-204ENST00000372862 CCDC180Q9P1Z9 1646 aa38.29■■■■□ 3.72
PABPC4-204ENST00000372862 ZCCHC6Q5VYS8 1495 aaKnown RBP37.34■■■■□ 3.57
PABPC4-204ENST00000372862 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
PABPC4-204ENST00000372862 DCAF1Q9Y4B6 1507 aa36.58■■■■□ 3.45
PABPC4-204ENST00000372862 DCAF8L2P0C7V8 631 aa36.53■■■■□ 3.44
PABPC4-204ENST00000372862 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
PABPC4-204ENST00000372862 SUPT5HO00267 1087 aaKnown RBP35.73■■■■□ 3.31
PABPC4-204ENST00000372862 ABCC9O60706 1549 aa35.67■■■■□ 3.3
PABPC4-204ENST00000372862 NACADO15069 1562 aa35.5■■■■□ 3.27
PABPC4-204ENST00000372862 SCRIBQ14160 1630 aa35.4■■■■□ 3.26
PABPC4-204ENST00000372862 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
PABPC4-204ENST00000372862 RSF1Q96T23 1441 aaPredicted RBP34.65■■■■□ 3.14
PABPC4-204ENST00000372862 CHIC1Q5VXU3 224 aa34.51■■■■□ 3.12
PABPC4-204ENST00000372862 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
PABPC4-204ENST00000372862 CECR2Q9BXF3 1484 aa34.4■■■■□ 3.1
PABPC4-204ENST00000372862 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
PABPC4-204ENST00000372862 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
PABPC4-204ENST00000372862 WIZO95785 1651 aa34.09■■■■□ 3.05
PABPC4-204ENST00000372862 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
PABPC4-204ENST00000372862 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
PABPC4-204ENST00000372862 PABPN1Q86U42 306 aaKnown RBP eCLIP33.8■■■■□ 3
PABPC4-204ENST00000372862 TOP2AP11388 1531 aaKnown RBP33.68■■■□□ 2.98
PABPC4-204ENST00000372862 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
PABPC4-204ENST00000372862 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
PABPC4-204ENST00000372862 SMARCA2P51531 1590 aa33.41■■■□□ 2.94
PABPC4-204ENST00000372862 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
PABPC4-204ENST00000372862 CCDC88BA6NC98 1476 aa33.38■■■□□ 2.93
PABPC4-204ENST00000372862 LOC105371045A0A1W2PR82 267 aa33.27■■■□□ 2.92
PABPC4-204ENST00000372862 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
PABPC4-204ENST00000372862 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
PABPC4-204ENST00000372862 FAM9AQ8IZU1 332 aaPredicted RBP32.97■■■□□ 2.87
PABPC4-204ENST00000372862 ABCC8Q09428 1581 aa32.95■■■□□ 2.87
PABPC4-204ENST00000372862 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
PABPC4-204ENST00000372862 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
PABPC4-204ENST00000372862 WRNQ14191 1432 aaPredicted RBP eCLIP32.62■■■□□ 2.81
PABPC4-204ENST00000372862 EHMT2Q96KQ7 1210 aa32.53■■■□□ 2.8
PABPC4-204ENST00000372862 PCGF6Q9BYE7 350 aa32.52■■■□□ 2.8
PABPC4-204ENST00000372862 EEA1Q15075 1411 aa32.5■■■□□ 2.79
PABPC4-204ENST00000372862 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
PABPC4-204ENST00000372862 SOGA1O94964 1423 aa32.45■■■□□ 2.79
PABPC4-204ENST00000372862 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
PABPC4-204ENST00000372862 TRIM26Q12899 539 aaPredicted RBP32.3■■■□□ 2.76
PABPC4-204ENST00000372862 CSRNP3Q8WYN3 585 aa32.3■■■□□ 2.76
PABPC4-204ENST00000372862 CC2D2AQ9P2K1 1620 aa32.28■■■□□ 2.76
PABPC4-204ENST00000372862 TOP2BQ02880 1626 aa32.26■■■□□ 2.75
PABPC4-204ENST00000372862 CFTRP13569 1480 aa32.24■■■□□ 2.75
PABPC4-204ENST00000372862 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
PABPC4-204ENST00000372862 PRDM2Q13029 1718 aa32.17■■■□□ 2.74
PABPC4-204ENST00000372862 TNIKQ9UKE5 1360 aa32.13■■■□□ 2.73
PABPC4-204ENST00000372862 HRCP23327 699 aa32.11■■■□□ 2.73
PABPC4-204ENST00000372862 GOLGA3Q08378 1498 aa32.11■■■□□ 2.73
PABPC4-204ENST00000372862 KIF21BO75037 1637 aa32.05■■■□□ 2.72
PABPC4-204ENST00000372862 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
PABPC4-204ENST00000372862 CEP162Q5TB80 1403 aa32.03■■■□□ 2.72
PABPC4-204ENST00000372862 UBTFP17480 764 aaKnown RBP32.01■■■□□ 2.71
PABPC4-204ENST00000372862 CUX1P39880 1505 aa32.01■■■□□ 2.71
PABPC4-204ENST00000372862 CADPSQ9ULU8 1353 aa32■■■□□ 2.71
PABPC4-204ENST00000372862 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
PABPC4-204ENST00000372862 KIF27Q86VH2 1401 aa31.73■■■□□ 2.67
PABPC4-204ENST00000372862 PPARGC1BQ86YN6 1023 aaKnown RBP31.7■■■□□ 2.66
PABPC4-204ENST00000372862 ERICH3Q5RHP9 1530 aa31.69■■■□□ 2.66
PABPC4-204ENST00000372862 PRXQ9BXM0 1461 aa31.66■■■□□ 2.66
PABPC4-204ENST00000372862 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
PABPC4-204ENST00000372862 CLIP1P30622 1438 aa31.62■■■□□ 2.65
PABPC4-204ENST00000372862 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
PABPC4-204ENST00000372862 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
PABPC4-204ENST00000372862 NESP48681 1621 aa31.53■■■□□ 2.64
PABPC4-204ENST00000372862 CUX2O14529 1486 aa31.5■■■□□ 2.63
PABPC4-204ENST00000372862 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
PABPC4-204ENST00000372862 VPS8Q8N3P4 1428 aa31.44■■■□□ 2.62
PABPC4-204ENST00000372862 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
PABPC4-204ENST00000372862 ZEB1P37275 1124 aaPredicted RBP31.38■■■□□ 2.61
PABPC4-204ENST00000372862 IGF1RP08069 1367 aa31.36■■■□□ 2.61
PABPC4-204ENST00000372862 RANGAP1P46060 587 aaPredicted RBP31.32■■■□□ 2.6
PABPC4-204ENST00000372862 TTBK1Q5TCY1 1321 aaPredicted RBP31.32■■■□□ 2.6
PABPC4-204ENST00000372862 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
PABPC4-204ENST00000372862 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
PABPC4-204ENST00000372862 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.6
PABPC4-204ENST00000372862 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
PABPC4-204ENST00000372862 CARMIL1Q5VZK9 1371 aa31.24■■■□□ 2.59
PABPC4-204ENST00000372862 APLP2Q06481 763 aa31.23■■■□□ 2.59
PABPC4-204ENST00000372862 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
PABPC4-204ENST00000372862 URB2Q14146 1524 aaKnown RBP31.22■■■□□ 2.59
PABPC4-204ENST00000372862 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
PABPC4-204ENST00000372862 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
PABPC4-204ENST00000372862 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
PABPC4-204ENST00000372862 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
PABPC4-204ENST00000372862 CUL7Q14999 1698 aa31.07■■■□□ 2.56
PABPC4-204ENST00000372862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.97■■■□□ 2.55
PABPC4-204ENST00000372862 ABCA5Q8WWZ7 1642 aa30.96■■■□□ 2.55
PABPC4-204ENST00000372862 CCER1Q8TC90 406 aaPredicted RBP30.95■■■□□ 2.54
PABPC4-204ENST00000372862 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.53
PABPC4-204ENST00000372862 CTTNBP2Q8WZ74 1663 aa30.87■■■□□ 2.53
PABPC4-204ENST00000372862 TDRD9Q8NDG6 1382 aaKnown RBP30.87■■■□□ 2.53
PABPC4-204ENST00000372862 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
PABPC4-204ENST00000372862 MRC2Q9UBG0 1479 aa30.84■■■□□ 2.53
PABPC4-204ENST00000372862 KANK4Q5T7N3 995 aaPredicted RBP30.78■■■□□ 2.52
PABPC4-204ENST00000372862 EFCAB5A4FU69 1503 aa30.76■■■□□ 2.51
PABPC4-204ENST00000372862 FHAD1B1AJZ9 1412 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms