RNA–Protein interactions for RNA: ENST00000466194.1

HMGN2-205, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-205ENST00000466194 NISCHQ9Y2I1 1504 aa44.32■■■■■ 4.69
HMGN2-205ENST00000466194 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
HMGN2-205ENST00000466194 ABCC9O60706 1549 aa39.2■■■■□ 3.87
HMGN2-205ENST00000466194 DCAF8L2P0C7V8 631 aa37.55■■■■□ 3.6
HMGN2-205ENST00000466194 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
HMGN2-205ENST00000466194 NACADO15069 1562 aa37.24■■■■□ 3.55
HMGN2-205ENST00000466194 MYO15BQ96JP2 1530 aa36.85■■■■□ 3.49
HMGN2-205ENST00000466194 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
HMGN2-205ENST00000466194 PABPN1Q86U42 306 aaKnown RBP eCLIP36.73■■■■□ 3.47
HMGN2-205ENST00000466194 DCAF1Q9Y4B6 1507 aa36.55■■■■□ 3.44
HMGN2-205ENST00000466194 DNAJC5BQ9UF47 199 aa36.52■■■■□ 3.44
HMGN2-205ENST00000466194 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
HMGN2-205ENST00000466194 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
HMGN2-205ENST00000466194 SCRIBQ14160 1630 aa36.05■■■■□ 3.36
HMGN2-205ENST00000466194 SHROOM4Q9ULL8 1493 aa35.74■■■■□ 3.31
HMGN2-205ENST00000466194 EIF4G1Q04637 1599 aaKnown RBP35.35■■■■□ 3.25
HMGN2-205ENST00000466194 CC2D2AQ9P2K1 1620 aa35.32■■■■□ 3.25
HMGN2-205ENST00000466194 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
HMGN2-205ENST00000466194 NCAPD3P42695 1498 aa34.46■■■■□ 3.11
HMGN2-205ENST00000466194 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
HMGN2-205ENST00000466194 SMARCA4P51532 1647 aa34.4■■■■□ 3.1
HMGN2-205ENST00000466194 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.09
HMGN2-205ENST00000466194 SMARCA2P51531 1590 aa34.27■■■■□ 3.08
HMGN2-205ENST00000466194 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
HMGN2-205ENST00000466194 HMGXB3Q12766 1538 aa34.11■■■■□ 3.05
HMGN2-205ENST00000466194 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
HMGN2-205ENST00000466194 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
HMGN2-205ENST00000466194 NESP48681 1621 aa33.8■■■■□ 3
HMGN2-205ENST00000466194 ERCC6Q03468 1493 aa33.78■■■■□ 3
HMGN2-205ENST00000466194 WIZO95785 1651 aa33.74■■■□□ 2.99
HMGN2-205ENST00000466194 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.99
HMGN2-205ENST00000466194 LAMC3Q9Y6N6 1575 aa33.5■■■□□ 2.95
HMGN2-205ENST00000466194 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
HMGN2-205ENST00000466194 CUX2O14529 1486 aa33.48■■■□□ 2.95
HMGN2-205ENST00000466194 PDS5BQ9NTI5 1447 aa33.42■■■□□ 2.94
HMGN2-205ENST00000466194 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
HMGN2-205ENST00000466194 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
HMGN2-205ENST00000466194 THOC2Q8NI27 1593 aaKnown RBP33.17■■■□□ 2.9
HMGN2-205ENST00000466194 DNAJC5Q9H3Z4 198 aa33.15■■■□□ 2.9
HMGN2-205ENST00000466194 CFTRP13569 1480 aa33.14■■■□□ 2.9
HMGN2-205ENST00000466194 CCDC88BA6NC98 1476 aa33.07■■■□□ 2.88
HMGN2-205ENST00000466194 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
HMGN2-205ENST00000466194 MRC2Q9UBG0 1479 aa33.05■■■□□ 2.88
HMGN2-205ENST00000466194 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
HMGN2-205ENST00000466194 WDR62O43379 1518 aa32.88■■■□□ 2.85
HMGN2-205ENST00000466194 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
HMGN2-205ENST00000466194 URB2Q14146 1524 aaKnown RBP32.74■■■□□ 2.83
HMGN2-205ENST00000466194 PRDM2Q13029 1718 aa32.55■■■□□ 2.8
HMGN2-205ENST00000466194 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
HMGN2-205ENST00000466194 ABCC8Q09428 1581 aa32.41■■■□□ 2.78
HMGN2-205ENST00000466194 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
HMGN2-205ENST00000466194 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
HMGN2-205ENST00000466194 ZNF608Q9ULD9 1512 aaPredicted RBP32.3■■■□□ 2.76
HMGN2-205ENST00000466194 OSCARQ8IYS5 282 aa32.26■■■□□ 2.75
HMGN2-205ENST00000466194 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
HMGN2-205ENST00000466194 SOGA1O94964 1423 aa32.13■■■□□ 2.73
HMGN2-205ENST00000466194 AQRO60306 1485 aaKnown RBP eCLIP32.12■■■□□ 2.731e-12■■■■■ 28.2
HMGN2-205ENST00000466194 RAD54L2Q9Y4B4 1467 aa32.12■■■□□ 2.73
HMGN2-205ENST00000466194 CUX1P39880 1505 aa32.06■■■□□ 2.72
HMGN2-205ENST00000466194 TARBP1Q13395 1621 aaKnown RBP32.06■■■□□ 2.72
HMGN2-205ENST00000466194 TDRD9Q8NDG6 1382 aaKnown RBP32.05■■■□□ 2.72
HMGN2-205ENST00000466194 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
HMGN2-205ENST00000466194 EIF4G3O43432 1585 aaKnown RBP31.99■■■□□ 2.71
HMGN2-205ENST00000466194 FBLN2P98095 1184 aa31.94■■■□□ 2.7
HMGN2-205ENST00000466194 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
HMGN2-205ENST00000466194 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
HMGN2-205ENST00000466194 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
HMGN2-205ENST00000466194 SNAPC4Q5SXM2 1469 aa31.72■■■□□ 2.67
HMGN2-205ENST00000466194 GRIN2BQ13224 1484 aa31.71■■■□□ 2.67
HMGN2-205ENST00000466194 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
HMGN2-205ENST00000466194 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
HMGN2-205ENST00000466194 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
HMGN2-205ENST00000466194 CHD1O14646 1710 aa31.63■■■□□ 2.65
HMGN2-205ENST00000466194 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
HMGN2-205ENST00000466194 TOP2BQ02880 1626 aa31.61■■■□□ 2.65
HMGN2-205ENST00000466194 MAGI1Q96QZ7 1491 aaPredicted RBP31.61■■■□□ 2.65
HMGN2-205ENST00000466194 BIVM-ERCC5R4GMW8 1640 aa31.55■■■□□ 2.64
HMGN2-205ENST00000466194 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
HMGN2-205ENST00000466194 RIMBP3CA6NJZ7 1639 aa31.54■■■□□ 2.64
HMGN2-205ENST00000466194 RIMBP3BA6NNM3 1639 aa31.54■■■□□ 2.64
HMGN2-205ENST00000466194 RIMBP3Q9UFD9 1639 aa31.54■■■□□ 2.64
HMGN2-205ENST00000466194 SYNJ2O15056 1496 aa31.53■■■□□ 2.64
HMGN2-205ENST00000466194 CYB5RLQ6IPT4 315 aa31.52■■■□□ 2.64
HMGN2-205ENST00000466194 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
HMGN2-205ENST00000466194 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
HMGN2-205ENST00000466194 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
HMGN2-205ENST00000466194 FHAD1B1AJZ9 1412 aa31.3■■■□□ 2.6
HMGN2-205ENST00000466194 ARAP1Q96P48 1450 aa31.28■■■□□ 2.6
HMGN2-205ENST00000466194 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
HMGN2-205ENST00000466194 ERICH3Q5RHP9 1530 aa31.25■■■□□ 2.59
HMGN2-205ENST00000466194 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
HMGN2-205ENST00000466194 NUP160Q12769 1436 aa31.16■■■□□ 2.58
HMGN2-205ENST00000466194 IGF1RP08069 1367 aa31.15■■■□□ 2.58
HMGN2-205ENST00000466194 KIF27Q86VH2 1401 aa31.14■■■□□ 2.58
HMGN2-205ENST00000466194 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
HMGN2-205ENST00000466194 JPH4Q96JJ6 628 aa31.03■■■□□ 2.56
HMGN2-205ENST00000466194 TRHP20396 242 aaPredicted RBP31.02■■■□□ 2.56
HMGN2-205ENST00000466194 ERCC6L2Q5T890 1561 aa30.97■■■□□ 2.55
HMGN2-205ENST00000466194 CARMIL1Q5VZK9 1371 aa30.93■■■□□ 2.54
HMGN2-205ENST00000466194 PRG4Q92954 1404 aaPredicted RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms