RNA–Protein interactions for RNA: ENST00000448830.1

SERF2-213, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2

Gene SERF2, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-213ENST00000448830 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
SERF2-213ENST00000448830 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
SERF2-213ENST00000448830 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
SERF2-213ENST00000448830 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
SERF2-213ENST00000448830 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
SERF2-213ENST00000448830 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
SERF2-213ENST00000448830 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
SERF2-213ENST00000448830 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
SERF2-213ENST00000448830 MYO15BQ96JP2 1530 aa22.58■■□□□ 1.21
SERF2-213ENST00000448830 ABCC9O60706 1549 aa22.55■■□□□ 1.2
SERF2-213ENST00000448830 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
SERF2-213ENST00000448830 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
SERF2-213ENST00000448830 NACADO15069 1562 aa22.31■■□□□ 1.16
SERF2-213ENST00000448830 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
SERF2-213ENST00000448830 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
SERF2-213ENST00000448830 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
SERF2-213ENST00000448830 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
SERF2-213ENST00000448830 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
SERF2-213ENST00000448830 WIZO95785 1651 aa21.82■■□□□ 1.08
SERF2-213ENST00000448830 PCGF6Q9BYE7 350 aa21.82■■□□□ 1.08
SERF2-213ENST00000448830 HRCP23327 699 aa21.77■■□□□ 1.08
SERF2-213ENST00000448830 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
SERF2-213ENST00000448830 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
SERF2-213ENST00000448830 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
SERF2-213ENST00000448830 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
SERF2-213ENST00000448830 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
SERF2-213ENST00000448830 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
SERF2-213ENST00000448830 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
SERF2-213ENST00000448830 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
SERF2-213ENST00000448830 TRIM26Q12899 539 aaPredicted RBP21.46■■□□□ 1.03
SERF2-213ENST00000448830 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
SERF2-213ENST00000448830 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
SERF2-213ENST00000448830 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
SERF2-213ENST00000448830 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
SERF2-213ENST00000448830 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
SERF2-213ENST00000448830 ABCC8Q09428 1581 aa21.27■■□□□ 1
SERF2-213ENST00000448830 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
SERF2-213ENST00000448830 SOGA1O94964 1423 aa21.07■□□□□ 0.96
SERF2-213ENST00000448830 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
SERF2-213ENST00000448830 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
SERF2-213ENST00000448830 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
SERF2-213ENST00000448830 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
SERF2-213ENST00000448830 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
SERF2-213ENST00000448830 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
SERF2-213ENST00000448830 EEA1Q15075 1411 aa20.9■□□□□ 0.94
SERF2-213ENST00000448830 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
SERF2-213ENST00000448830 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
SERF2-213ENST00000448830 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
SERF2-213ENST00000448830 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
SERF2-213ENST00000448830 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
SERF2-213ENST00000448830 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
SERF2-213ENST00000448830 MYT1Q01538 1121 aa20.73■□□□□ 0.91
SERF2-213ENST00000448830 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
SERF2-213ENST00000448830 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
SERF2-213ENST00000448830 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
SERF2-213ENST00000448830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SERF2-213ENST00000448830 HMGXB3Q12766 1538 aa20.62■□□□□ 0.89
SERF2-213ENST00000448830 KIF21BO75037 1637 aa20.61■□□□□ 0.89
SERF2-213ENST00000448830 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
SERF2-213ENST00000448830 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
SERF2-213ENST00000448830 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
SERF2-213ENST00000448830 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.87
SERF2-213ENST00000448830 CLIP1P30622 1438 aa20.51■□□□□ 0.87
SERF2-213ENST00000448830 CFTRP13569 1480 aa20.46■□□□□ 0.87
SERF2-213ENST00000448830 CUX1P39880 1505 aa20.45■□□□□ 0.86
SERF2-213ENST00000448830 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
SERF2-213ENST00000448830 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
SERF2-213ENST00000448830 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
SERF2-213ENST00000448830 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
SERF2-213ENST00000448830 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
SERF2-213ENST00000448830 KIF27Q86VH2 1401 aa20.31■□□□□ 0.84
SERF2-213ENST00000448830 APLP2Q06481 763 aa20.29■□□□□ 0.84
SERF2-213ENST00000448830 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
SERF2-213ENST00000448830 NEUROD1Q13562 356 aa20.27■□□□□ 0.83
SERF2-213ENST00000448830 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
SERF2-213ENST00000448830 ACIN1Q9UKV3 1341 aaKnown RBP20.23■□□□□ 0.83
SERF2-213ENST00000448830 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
SERF2-213ENST00000448830 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
SERF2-213ENST00000448830 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
SERF2-213ENST00000448830 CUX2O14529 1486 aa20.15■□□□□ 0.82
SERF2-213ENST00000448830 IGF1RP08069 1367 aa20.15■□□□□ 0.82
SERF2-213ENST00000448830 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
SERF2-213ENST00000448830 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
SERF2-213ENST00000448830 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
SERF2-213ENST00000448830 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SERF2-213ENST00000448830 DIEXFQ68CQ4 756 aaKnown RBP20.05■□□□□ 0.8
SERF2-213ENST00000448830 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
SERF2-213ENST00000448830 NESP48681 1621 aa19.98■□□□□ 0.79
SERF2-213ENST00000448830 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
SERF2-213ENST00000448830 RAD54L2Q9Y4B4 1467 aa19.95■□□□□ 0.78
SERF2-213ENST00000448830 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
SERF2-213ENST00000448830 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
SERF2-213ENST00000448830 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
SERF2-213ENST00000448830 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
SERF2-213ENST00000448830 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.78
SERF2-213ENST00000448830 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
SERF2-213ENST00000448830 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
SERF2-213ENST00000448830 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
SERF2-213ENST00000448830 CCNB3Q8WWL7 1395 aa19.84■□□□□ 0.77
SERF2-213ENST00000448830 CENPBP07199 599 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms