RNA–Protein interactions for RNA: ENST00000336104.5

NINL-202, Transcript of ninein like, humanhuman

TSL 3

Gene NINL, Length 439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-202ENST00000336104 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
NINL-202ENST00000336104 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
NINL-202ENST00000336104 ABCC9O60706 1549 aa28.24■■■□□ 2.11
NINL-202ENST00000336104 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
NINL-202ENST00000336104 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
NINL-202ENST00000336104 NACADO15069 1562 aa27.21■■□□□ 1.95
NINL-202ENST00000336104 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
NINL-202ENST00000336104 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
NINL-202ENST00000336104 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
NINL-202ENST00000336104 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
NINL-202ENST00000336104 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.824e-6■□□□□ 9.3
NINL-202ENST00000336104 SCRIBQ14160 1630 aa26.39■■□□□ 1.81
NINL-202ENST00000336104 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
NINL-202ENST00000336104 SHROOM4Q9ULL8 1493 aa26.13■■□□□ 1.77
NINL-202ENST00000336104 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
NINL-202ENST00000336104 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
NINL-202ENST00000336104 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
NINL-202ENST00000336104 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
NINL-202ENST00000336104 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
NINL-202ENST00000336104 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
NINL-202ENST00000336104 ATAD2BQ9ULI0 1458 aa25.13■■□□□ 1.61
NINL-202ENST00000336104 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
NINL-202ENST00000336104 MROH2BQ7Z745 1585 aa25.11■■□□□ 1.61
NINL-202ENST00000336104 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
NINL-202ENST00000336104 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
NINL-202ENST00000336104 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
NINL-202ENST00000336104 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
NINL-202ENST00000336104 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
NINL-202ENST00000336104 WIZO95785 1651 aa24.84■■□□□ 1.57
NINL-202ENST00000336104 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
NINL-202ENST00000336104 NESP48681 1621 aa24.46■■□□□ 1.51
NINL-202ENST00000336104 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
NINL-202ENST00000336104 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
NINL-202ENST00000336104 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
NINL-202ENST00000336104 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
NINL-202ENST00000336104 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
NINL-202ENST00000336104 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
NINL-202ENST00000336104 CFTRP13569 1480 aa24.26■■□□□ 1.47
NINL-202ENST00000336104 KIF21AQ7Z4S6 1674 aa24.15■■□□□ 1.46
NINL-202ENST00000336104 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
NINL-202ENST00000336104 CUX2O14529 1486 aa24.07■■□□□ 1.44
NINL-202ENST00000336104 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
NINL-202ENST00000336104 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
NINL-202ENST00000336104 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
NINL-202ENST00000336104 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
NINL-202ENST00000336104 WDR62O43379 1518 aa23.91■■□□□ 1.42
NINL-202ENST00000336104 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
NINL-202ENST00000336104 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
NINL-202ENST00000336104 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
NINL-202ENST00000336104 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
NINL-202ENST00000336104 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
NINL-202ENST00000336104 CUX1P39880 1505 aa23.55■■□□□ 1.36
NINL-202ENST00000336104 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
NINL-202ENST00000336104 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
NINL-202ENST00000336104 SOGA1O94964 1423 aa23.45■■□□□ 1.34
NINL-202ENST00000336104 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
NINL-202ENST00000336104 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
NINL-202ENST00000336104 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
NINL-202ENST00000336104 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
NINL-202ENST00000336104 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
NINL-202ENST00000336104 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
NINL-202ENST00000336104 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
NINL-202ENST00000336104 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.324e-9■□□□□ 8.9
NINL-202ENST00000336104 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
NINL-202ENST00000336104 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
NINL-202ENST00000336104 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
NINL-202ENST00000336104 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
NINL-202ENST00000336104 ABCA10Q8WWZ4 1543 aa23.25■■□□□ 1.31
NINL-202ENST00000336104 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
NINL-202ENST00000336104 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
NINL-202ENST00000336104 OSCARQ8IYS5 282 aa23.15■■□□□ 1.3
NINL-202ENST00000336104 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
NINL-202ENST00000336104 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
NINL-202ENST00000336104 MAGI1Q96QZ7 1491 aaPredicted RBP23.08■■□□□ 1.29
NINL-202ENST00000336104 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
NINL-202ENST00000336104 FBLN2P98095 1184 aa23.06■■□□□ 1.28
NINL-202ENST00000336104 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
NINL-202ENST00000336104 CHD1O14646 1710 aa23.01■■□□□ 1.27
NINL-202ENST00000336104 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
NINL-202ENST00000336104 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
NINL-202ENST00000336104 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
NINL-202ENST00000336104 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
NINL-202ENST00000336104 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
NINL-202ENST00000336104 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
NINL-202ENST00000336104 IGF1RP08069 1367 aa22.88■■□□□ 1.25
NINL-202ENST00000336104 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
NINL-202ENST00000336104 CUL7Q14999 1698 aa22.77■■□□□ 1.24
NINL-202ENST00000336104 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
NINL-202ENST00000336104 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
NINL-202ENST00000336104 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
NINL-202ENST00000336104 NUP160Q12769 1436 aa22.74■■□□□ 1.23
NINL-202ENST00000336104 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
NINL-202ENST00000336104 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
NINL-202ENST00000336104 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
NINL-202ENST00000336104 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
NINL-202ENST00000336104 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
NINL-202ENST00000336104 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
NINL-202ENST00000336104 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
NINL-202ENST00000336104 EEA1Q15075 1411 aa22.58■■□□□ 1.21
NINL-202ENST00000336104 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms