RNA–Protein interactions for RNA: ENST00000353660.7

RBCK1-201, Transcript of RANBP2-type and C3HC4-type zinc finger containing 1, humanhuman

TSL 1 (best) BASIC

Gene RBCK1, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBCK1-201ENST00000353660 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
RBCK1-201ENST00000353660 CCDC180Q9P1Z9 1646 aa29.78■■■□□ 2.36
RBCK1-201ENST00000353660 ABCC9O60706 1549 aa28.51■■■□□ 2.15
RBCK1-201ENST00000353660 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
RBCK1-201ENST00000353660 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.09
RBCK1-201ENST00000353660 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
RBCK1-201ENST00000353660 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
RBCK1-201ENST00000353660 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
RBCK1-201ENST00000353660 NACADO15069 1562 aa27.8■■■□□ 2.04
RBCK1-201ENST00000353660 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
RBCK1-201ENST00000353660 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
RBCK1-201ENST00000353660 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
RBCK1-201ENST00000353660 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
RBCK1-201ENST00000353660 BICRAQ9NZM4 1560 aa26.85■■□□□ 1.89
RBCK1-201ENST00000353660 PABPN1Q86U42 306 aaKnown RBP eCLIP26.79■■□□□ 1.887e-8■□□□□ 8.8
RBCK1-201ENST00000353660 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
RBCK1-201ENST00000353660 HRCP23327 699 aa26.42■■□□□ 1.82
RBCK1-201ENST00000353660 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
RBCK1-201ENST00000353660 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
RBCK1-201ENST00000353660 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
RBCK1-201ENST00000353660 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
RBCK1-201ENST00000353660 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
RBCK1-201ENST00000353660 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
RBCK1-201ENST00000353660 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
RBCK1-201ENST00000353660 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
RBCK1-201ENST00000353660 WIZO95785 1651 aa25.98■■□□□ 1.75
RBCK1-201ENST00000353660 PEG3Q9GZU2 1588 aa25.83■■□□□ 1.73
RBCK1-201ENST00000353660 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
RBCK1-201ENST00000353660 PPARGC1BQ86YN6 1023 aaKnown RBP25.81■■□□□ 1.72
RBCK1-201ENST00000353660 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
RBCK1-201ENST00000353660 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
RBCK1-201ENST00000353660 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
RBCK1-201ENST00000353660 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
RBCK1-201ENST00000353660 NCAPD3P42695 1498 aa25.64■■□□□ 1.7
RBCK1-201ENST00000353660 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
RBCK1-201ENST00000353660 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
RBCK1-201ENST00000353660 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
RBCK1-201ENST00000353660 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
RBCK1-201ENST00000353660 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.66
RBCK1-201ENST00000353660 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
RBCK1-201ENST00000353660 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
RBCK1-201ENST00000353660 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
RBCK1-201ENST00000353660 CFTRP13569 1480 aa24.97■■□□□ 1.59
RBCK1-201ENST00000353660 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
RBCK1-201ENST00000353660 NESP48681 1621 aa24.91■■□□□ 1.58
RBCK1-201ENST00000353660 PRDM2Q13029 1718 aa24.89■■□□□ 1.58
RBCK1-201ENST00000353660 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
RBCK1-201ENST00000353660 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
RBCK1-201ENST00000353660 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.55
RBCK1-201ENST00000353660 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
RBCK1-201ENST00000353660 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
RBCK1-201ENST00000353660 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
RBCK1-201ENST00000353660 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
RBCK1-201ENST00000353660 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
RBCK1-201ENST00000353660 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
RBCK1-201ENST00000353660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
RBCK1-201ENST00000353660 PELP1Q8IZL8 1130 aaKnown RBP24.54■■□□□ 1.52
RBCK1-201ENST00000353660 CUX1P39880 1505 aa24.51■■□□□ 1.51
RBCK1-201ENST00000353660 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
RBCK1-201ENST00000353660 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
RBCK1-201ENST00000353660 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
RBCK1-201ENST00000353660 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
RBCK1-201ENST00000353660 EEA1Q15075 1411 aa24.47■■□□□ 1.51
RBCK1-201ENST00000353660 SOGA1O94964 1423 aa24.44■■□□□ 1.5
RBCK1-201ENST00000353660 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
RBCK1-201ENST00000353660 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
RBCK1-201ENST00000353660 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
RBCK1-201ENST00000353660 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
RBCK1-201ENST00000353660 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
RBCK1-201ENST00000353660 TTBK1Q5TCY1 1321 aaPredicted RBP24.37■■□□□ 1.49
RBCK1-201ENST00000353660 TNIKQ9UKE5 1360 aa24.35■■□□□ 1.49
RBCK1-201ENST00000353660 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
RBCK1-201ENST00000353660 RUSC2Q8N2Y8 1516 aa24.33■■□□□ 1.48
RBCK1-201ENST00000353660 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
RBCK1-201ENST00000353660 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
RBCK1-201ENST00000353660 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
RBCK1-201ENST00000353660 WDR62O43379 1518 aa24.28■■□□□ 1.48
RBCK1-201ENST00000353660 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
RBCK1-201ENST00000353660 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
RBCK1-201ENST00000353660 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
RBCK1-201ENST00000353660 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
RBCK1-201ENST00000353660 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
RBCK1-201ENST00000353660 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
RBCK1-201ENST00000353660 KIF21BO75037 1637 aa24.12■■□□□ 1.45
RBCK1-201ENST00000353660 CUX2O14529 1486 aa24.1■■□□□ 1.45
RBCK1-201ENST00000353660 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
RBCK1-201ENST00000353660 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
RBCK1-201ENST00000353660 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
RBCK1-201ENST00000353660 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
RBCK1-201ENST00000353660 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
RBCK1-201ENST00000353660 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
RBCK1-201ENST00000353660 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
RBCK1-201ENST00000353660 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.43
RBCK1-201ENST00000353660 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
RBCK1-201ENST00000353660 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
RBCK1-201ENST00000353660 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
RBCK1-201ENST00000353660 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
RBCK1-201ENST00000353660 CLIP1P30622 1438 aa23.91■■□□□ 1.42
RBCK1-201ENST00000353660 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
RBCK1-201ENST00000353660 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms