RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
HDAC7-219ENST00000470668 DCAF8L2P0C7V8 631 aa24.05■■□□□ 1.44
HDAC7-219ENST00000470668 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.37
HDAC7-219ENST00000470668 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
HDAC7-219ENST00000470668 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
HDAC7-219ENST00000470668 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
HDAC7-219ENST00000470668 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
HDAC7-219ENST00000470668 HRCP23327 699 aa22.43■■□□□ 1.18
HDAC7-219ENST00000470668 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
HDAC7-219ENST00000470668 FAM9AQ8IZU1 332 aaPredicted RBP22.2■■□□□ 1.14
HDAC7-219ENST00000470668 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
HDAC7-219ENST00000470668 MYT1Q01538 1121 aa22.11■■□□□ 1.13
HDAC7-219ENST00000470668 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
HDAC7-219ENST00000470668 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
HDAC7-219ENST00000470668 CCER1Q8TC90 406 aaPredicted RBP21.94■■□□□ 1.1
HDAC7-219ENST00000470668 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
HDAC7-219ENST00000470668 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
HDAC7-219ENST00000470668 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
HDAC7-219ENST00000470668 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
HDAC7-219ENST00000470668 TRIM41Q8WV44 630 aa21.58■■□□□ 1.04
HDAC7-219ENST00000470668 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
HDAC7-219ENST00000470668 APLP2Q06481 763 aa21.5■■□□□ 1.03
HDAC7-219ENST00000470668 GTF3C3Q9Y5Q9 886 aa21.35■■□□□ 1.01
HDAC7-219ENST00000470668 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
HDAC7-219ENST00000470668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
HDAC7-219ENST00000470668 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
HDAC7-219ENST00000470668 NEFLP07196 543 aa21.18■□□□□ 0.98
HDAC7-219ENST00000470668 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
HDAC7-219ENST00000470668 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
HDAC7-219ENST00000470668 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
HDAC7-219ENST00000470668 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
HDAC7-219ENST00000470668 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
HDAC7-219ENST00000470668 BCANQ96GW7 911 aa20.79■□□□□ 0.92
HDAC7-219ENST00000470668 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
HDAC7-219ENST00000470668 ITGAEP38570 1179 aa20.65■□□□□ 0.9
HDAC7-219ENST00000470668 ABCC9O60706 1549 aa20.64■□□□□ 0.89
HDAC7-219ENST00000470668 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
HDAC7-219ENST00000470668 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
HDAC7-219ENST00000470668 CNGB1Q14028 1251 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-219ENST00000470668 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-219ENST00000470668 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
HDAC7-219ENST00000470668 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
HDAC7-219ENST00000470668 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
HDAC7-219ENST00000470668 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.83
HDAC7-219ENST00000470668 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-219ENST00000470668 MIER1Q8N108 512 aa20.21■□□□□ 0.83
HDAC7-219ENST00000470668 CDK11AQ9UQ88 783 aaPredicted RBP20.21■□□□□ 0.83
HDAC7-219ENST00000470668 FKBP8Q14318 412 aa20.19■□□□□ 0.82
HDAC7-219ENST00000470668 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
HDAC7-219ENST00000470668 ANP32CO43423 234 aa20.04■□□□□ 0.8
HDAC7-219ENST00000470668 ANP32EQ9BTT0 268 aa20.03■□□□□ 0.8
HDAC7-219ENST00000470668 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
HDAC7-219ENST00000470668 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
HDAC7-219ENST00000470668 BCL11AQ9H165 835 aa19.95■□□□□ 0.78
HDAC7-219ENST00000470668 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
HDAC7-219ENST00000470668 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
HDAC7-219ENST00000470668 NBR1Q14596 966 aa19.9■□□□□ 0.78
HDAC7-219ENST00000470668 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
HDAC7-219ENST00000470668 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.76
HDAC7-219ENST00000470668 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
HDAC7-219ENST00000470668 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
HDAC7-219ENST00000470668 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
HDAC7-219ENST00000470668 IRX6P78412 446 aaPredicted RBP19.79■□□□□ 0.76
HDAC7-219ENST00000470668 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
HDAC7-219ENST00000470668 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
HDAC7-219ENST00000470668 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
HDAC7-219ENST00000470668 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
HDAC7-219ENST00000470668 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-219ENST00000470668 MYT1LQ9UL68 1186 aa19.63■□□□□ 0.73
HDAC7-219ENST00000470668 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
HDAC7-219ENST00000470668 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
HDAC7-219ENST00000470668 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
HDAC7-219ENST00000470668 ARID3CA6NKF2 412 aa19.54■□□□□ 0.72
HDAC7-219ENST00000470668 RTN4Q9NQC3 1192 aaKnown RBP19.53■□□□□ 0.72
HDAC7-219ENST00000470668 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
HDAC7-219ENST00000470668 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
HDAC7-219ENST00000470668 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
HDAC7-219ENST00000470668 RBM19Q9Y4C8 960 aaKnown RBP19.46■□□□□ 0.71
HDAC7-219ENST00000470668 SALL2Q9Y467 1007 aaPredicted RBP19.4■□□□□ 0.7
HDAC7-219ENST00000470668 ARXQ96QS3 562 aa19.38■□□□□ 0.69
HDAC7-219ENST00000470668 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
HDAC7-219ENST00000470668 DEKP35659 375 aaKnown RBP19.35■□□□□ 0.69
HDAC7-219ENST00000470668 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
HDAC7-219ENST00000470668 MRS2Q9HD23 443 aa19.32■□□□□ 0.68
HDAC7-219ENST00000470668 FBLN2P98095 1184 aa19.32■□□□□ 0.68
HDAC7-219ENST00000470668 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
HDAC7-219ENST00000470668 GLIPR1L2Q4G1C9 344 aa19.28■□□□□ 0.68
HDAC7-219ENST00000470668 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
HDAC7-219ENST00000470668 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
HDAC7-219ENST00000470668 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
HDAC7-219ENST00000470668 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
HDAC7-219ENST00000470668 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
HDAC7-219ENST00000470668 CLIP1P30622 1438 aa19.18■□□□□ 0.66
HDAC7-219ENST00000470668 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
HDAC7-219ENST00000470668 NEFMP07197 916 aa19.17■□□□□ 0.66
HDAC7-219ENST00000470668 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
HDAC7-219ENST00000470668 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
HDAC7-219ENST00000470668 PPP4R2Q9NY27 417 aa19.13■□□□□ 0.65
HDAC7-219ENST00000470668 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
HDAC7-219ENST00000470668 SOGA1O94964 1423 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms