RNA–Protein interactions for RNA: ENST00000380610.8

HDAC7-203, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,261 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-203ENST00000380610 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
HDAC7-203ENST00000380610 HRCP23327 699 aa22.12■■□□□ 1.13
HDAC7-203ENST00000380610 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
HDAC7-203ENST00000380610 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
HDAC7-203ENST00000380610 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
HDAC7-203ENST00000380610 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
HDAC7-203ENST00000380610 MYO15BQ96JP2 1530 aa21.33■■□□□ 1.01
HDAC7-203ENST00000380610 CHIC1Q5VXU3 224 aa21.33■■□□□ 1
HDAC7-203ENST00000380610 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
HDAC7-203ENST00000380610 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
HDAC7-203ENST00000380610 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
HDAC7-203ENST00000380610 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
HDAC7-203ENST00000380610 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
HDAC7-203ENST00000380610 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
HDAC7-203ENST00000380610 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
HDAC7-203ENST00000380610 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
HDAC7-203ENST00000380610 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
HDAC7-203ENST00000380610 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
HDAC7-203ENST00000380610 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
HDAC7-203ENST00000380610 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
HDAC7-203ENST00000380610 MYT1Q01538 1121 aa20.41■□□□□ 0.86
HDAC7-203ENST00000380610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-203ENST00000380610 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-203ENST00000380610 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
HDAC7-203ENST00000380610 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-203ENST00000380610 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
HDAC7-203ENST00000380610 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
HDAC7-203ENST00000380610 DIEXFQ68CQ4 756 aaKnown RBP20.21■□□□□ 0.83
HDAC7-203ENST00000380610 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
HDAC7-203ENST00000380610 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
HDAC7-203ENST00000380610 MIER1Q8N108 512 aa19.72■□□□□ 0.75
HDAC7-203ENST00000380610 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-203ENST00000380610 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
HDAC7-203ENST00000380610 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
HDAC7-203ENST00000380610 BCANQ96GW7 911 aa19.36■□□□□ 0.69
HDAC7-203ENST00000380610 ANP32EQ9BTT0 268 aa19.36■□□□□ 0.69
HDAC7-203ENST00000380610 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
HDAC7-203ENST00000380610 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
HDAC7-203ENST00000380610 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
HDAC7-203ENST00000380610 ABCC9O60706 1549 aa19.3■□□□□ 0.68
HDAC7-203ENST00000380610 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
HDAC7-203ENST00000380610 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.67
HDAC7-203ENST00000380610 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
HDAC7-203ENST00000380610 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
HDAC7-203ENST00000380610 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
HDAC7-203ENST00000380610 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
HDAC7-203ENST00000380610 FKBP8Q14318 412 aa19.02■□□□□ 0.64
HDAC7-203ENST00000380610 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
HDAC7-203ENST00000380610 ITGAEP38570 1179 aa19■□□□□ 0.63
HDAC7-203ENST00000380610 APLP2Q06481 763 aa18.95■□□□□ 0.62
HDAC7-203ENST00000380610 RBM19Q9Y4C8 960 aaKnown RBP18.89■□□□□ 0.62
HDAC7-203ENST00000380610 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
HDAC7-203ENST00000380610 NACADO15069 1562 aa18.85■□□□□ 0.61
HDAC7-203ENST00000380610 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
HDAC7-203ENST00000380610 SOGA1O94964 1423 aa18.83■□□□□ 0.61
HDAC7-203ENST00000380610 NEFLP07196 543 aa18.82■□□□□ 0.6
HDAC7-203ENST00000380610 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
HDAC7-203ENST00000380610 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
HDAC7-203ENST00000380610 TRIM52Q96A61 297 aa18.79■□□□□ 0.6
HDAC7-203ENST00000380610 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
HDAC7-203ENST00000380610 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
HDAC7-203ENST00000380610 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
HDAC7-203ENST00000380610 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
HDAC7-203ENST00000380610 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
HDAC7-203ENST00000380610 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
HDAC7-203ENST00000380610 MSH5O43196 834 aa18.7■□□□□ 0.58
HDAC7-203ENST00000380610 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
HDAC7-203ENST00000380610 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-203ENST00000380610 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
HDAC7-203ENST00000380610 WIZO95785 1651 aa18.6■□□□□ 0.57
HDAC7-203ENST00000380610 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
HDAC7-203ENST00000380610 CLIP1P30622 1438 aa18.52■□□□□ 0.56
HDAC7-203ENST00000380610 NBR1Q14596 966 aa18.5■□□□□ 0.55
HDAC7-203ENST00000380610 CDK11AQ9UQ88 783 aaPredicted RBP18.49■□□□□ 0.55
HDAC7-203ENST00000380610 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
HDAC7-203ENST00000380610 DEKP35659 375 aaKnown RBP18.47■□□□□ 0.55
HDAC7-203ENST00000380610 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
HDAC7-203ENST00000380610 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
HDAC7-203ENST00000380610 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
HDAC7-203ENST00000380610 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
HDAC7-203ENST00000380610 ANP32CO43423 234 aa18.41■□□□□ 0.54
HDAC7-203ENST00000380610 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDAC7-203ENST00000380610 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
HDAC7-203ENST00000380610 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
HDAC7-203ENST00000380610 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.52
HDAC7-203ENST00000380610 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
HDAC7-203ENST00000380610 EEA1Q15075 1411 aa18.29■□□□□ 0.52
HDAC7-203ENST00000380610 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
HDAC7-203ENST00000380610 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.52
HDAC7-203ENST00000380610 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-203ENST00000380610 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-203ENST00000380610 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-203ENST00000380610 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
HDAC7-203ENST00000380610 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-203ENST00000380610 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
HDAC7-203ENST00000380610 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-203ENST00000380610 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
HDAC7-203ENST00000380610 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-203ENST00000380610 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
HDAC7-203ENST00000380610 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms