RNA–Protein interactions for RNA: ENST00000409617.5

SERF2-208, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2

Gene SERF2, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-208ENST00000409617 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
SERF2-208ENST00000409617 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
SERF2-208ENST00000409617 ABCC9O60706 1549 aa30.65■■■□□ 2.5
SERF2-208ENST00000409617 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
SERF2-208ENST00000409617 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
SERF2-208ENST00000409617 NACADO15069 1562 aa29.61■■■□□ 2.33
SERF2-208ENST00000409617 RB1CC1Q8TDY2 1594 aa29.58■■■□□ 2.33
SERF2-208ENST00000409617 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
SERF2-208ENST00000409617 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
SERF2-208ENST00000409617 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
SERF2-208ENST00000409617 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
SERF2-208ENST00000409617 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
SERF2-208ENST00000409617 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
SERF2-208ENST00000409617 SHROOM4Q9ULL8 1493 aa28.43■■■□□ 2.14
SERF2-208ENST00000409617 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
SERF2-208ENST00000409617 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
SERF2-208ENST00000409617 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
SERF2-208ENST00000409617 CECR2Q9BXF3 1484 aa27.69■■■□□ 2.02
SERF2-208ENST00000409617 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
SERF2-208ENST00000409617 SMARCA4P51532 1647 aa27.53■■■□□ 2
SERF2-208ENST00000409617 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
SERF2-208ENST00000409617 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
SERF2-208ENST00000409617 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
SERF2-208ENST00000409617 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
SERF2-208ENST00000409617 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
SERF2-208ENST00000409617 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
SERF2-208ENST00000409617 RSF1Q96T23 1441 aaPredicted RBP27.18■■□□□ 1.94
SERF2-208ENST00000409617 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
SERF2-208ENST00000409617 WIZO95785 1651 aa27.09■■□□□ 1.93
SERF2-208ENST00000409617 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
SERF2-208ENST00000409617 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
SERF2-208ENST00000409617 NESP48681 1621 aa26.58■■□□□ 1.85
SERF2-208ENST00000409617 LAMC3Q9Y6N6 1575 aa26.56■■□□□ 1.84
SERF2-208ENST00000409617 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
SERF2-208ENST00000409617 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
SERF2-208ENST00000409617 CFTRP13569 1480 aa26.43■■□□□ 1.82
SERF2-208ENST00000409617 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SERF2-208ENST00000409617 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
SERF2-208ENST00000409617 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
SERF2-208ENST00000409617 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SERF2-208ENST00000409617 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
SERF2-208ENST00000409617 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
SERF2-208ENST00000409617 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
SERF2-208ENST00000409617 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
SERF2-208ENST00000409617 CUX2O14529 1486 aa26.09■■□□□ 1.77
SERF2-208ENST00000409617 WDR62O43379 1518 aa26■■□□□ 1.75
SERF2-208ENST00000409617 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
SERF2-208ENST00000409617 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
SERF2-208ENST00000409617 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
SERF2-208ENST00000409617 DNMBPQ6XZF7 1577 aa25.79■■□□□ 1.72
SERF2-208ENST00000409617 CUX1P39880 1505 aa25.69■■□□□ 1.7
SERF2-208ENST00000409617 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
SERF2-208ENST00000409617 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
SERF2-208ENST00000409617 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
SERF2-208ENST00000409617 FGD5Q6ZNL6 1462 aa25.57■■□□□ 1.68
SERF2-208ENST00000409617 SOGA1O94964 1423 aa25.54■■□□□ 1.68
SERF2-208ENST00000409617 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
SERF2-208ENST00000409617 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
SERF2-208ENST00000409617 SYNJ1O43426 1573 aa25.5■■□□□ 1.67
SERF2-208ENST00000409617 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
SERF2-208ENST00000409617 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
SERF2-208ENST00000409617 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
SERF2-208ENST00000409617 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.652e-8■■■■■ 42.4
SERF2-208ENST00000409617 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
SERF2-208ENST00000409617 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
SERF2-208ENST00000409617 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
SERF2-208ENST00000409617 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
SERF2-208ENST00000409617 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
SERF2-208ENST00000409617 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
SERF2-208ENST00000409617 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
SERF2-208ENST00000409617 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
SERF2-208ENST00000409617 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
SERF2-208ENST00000409617 SNAPC4Q5SXM2 1469 aa25.12■■□□□ 1.61
SERF2-208ENST00000409617 MAGI1Q96QZ7 1491 aaPredicted RBP25.12■■□□□ 1.61
SERF2-208ENST00000409617 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
SERF2-208ENST00000409617 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
SERF2-208ENST00000409617 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
SERF2-208ENST00000409617 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
SERF2-208ENST00000409617 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
SERF2-208ENST00000409617 FBLN2P98095 1184 aa25.01■■□□□ 1.59
SERF2-208ENST00000409617 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
SERF2-208ENST00000409617 CHD1O14646 1710 aa24.98■■□□□ 1.59
SERF2-208ENST00000409617 IGF1RP08069 1367 aa24.97■■□□□ 1.59
SERF2-208ENST00000409617 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
SERF2-208ENST00000409617 FHAD1B1AJZ9 1412 aa24.96■■□□□ 1.59
SERF2-208ENST00000409617 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
SERF2-208ENST00000409617 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
SERF2-208ENST00000409617 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
SERF2-208ENST00000409617 CUL7Q14999 1698 aa24.83■■□□□ 1.57
SERF2-208ENST00000409617 CARMIL1Q5VZK9 1371 aa24.81■■□□□ 1.56
SERF2-208ENST00000409617 NUP160Q12769 1436 aa24.78■■□□□ 1.56
SERF2-208ENST00000409617 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
SERF2-208ENST00000409617 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
SERF2-208ENST00000409617 EEA1Q15075 1411 aa24.72■■□□□ 1.55
SERF2-208ENST00000409617 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
SERF2-208ENST00000409617 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
SERF2-208ENST00000409617 PRXQ9BXM0 1461 aa24.64■■□□□ 1.54
SERF2-208ENST00000409617 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
SERF2-208ENST00000409617 KIAA0586Q9BVV6 1533 aa24.59■■□□□ 1.53
SERF2-208ENST00000409617 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms