RNA–Protein interactions for RNA: ENST00000354334.7

HDAC7-202, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC7, Length 4,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-202ENST00000354334 NISCHQ9Y2I1 1504 aa24.47■■□□□ 1.51
HDAC7-202ENST00000354334 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
HDAC7-202ENST00000354334 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
HDAC7-202ENST00000354334 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
HDAC7-202ENST00000354334 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
HDAC7-202ENST00000354334 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
HDAC7-202ENST00000354334 TRIM41Q8WV44 630 aa20.89■□□□□ 0.94
HDAC7-202ENST00000354334 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
HDAC7-202ENST00000354334 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
HDAC7-202ENST00000354334 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
HDAC7-202ENST00000354334 ABCC9O60706 1549 aa20.61■□□□□ 0.89
HDAC7-202ENST00000354334 LOC105371045A0A1W2PR82 267 aa20.52■□□□□ 0.88
HDAC7-202ENST00000354334 APLP2Q06481 763 aa20.5■□□□□ 0.87
HDAC7-202ENST00000354334 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-202ENST00000354334 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
HDAC7-202ENST00000354334 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
HDAC7-202ENST00000354334 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.84
HDAC7-202ENST00000354334 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
HDAC7-202ENST00000354334 CCDC180Q9P1Z9 1646 aa20.17■□□□□ 0.82
HDAC7-202ENST00000354334 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
HDAC7-202ENST00000354334 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
HDAC7-202ENST00000354334 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-202ENST00000354334 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-202ENST00000354334 HRCP23327 699 aa19.98■□□□□ 0.79
HDAC7-202ENST00000354334 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
HDAC7-202ENST00000354334 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
HDAC7-202ENST00000354334 ITGAEP38570 1179 aa19.63■□□□□ 0.73
HDAC7-202ENST00000354334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
HDAC7-202ENST00000354334 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
HDAC7-202ENST00000354334 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
HDAC7-202ENST00000354334 CENPBP07199 599 aaPredicted RBP19.49■□□□□ 0.71
HDAC7-202ENST00000354334 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
HDAC7-202ENST00000354334 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
HDAC7-202ENST00000354334 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
HDAC7-202ENST00000354334 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
HDAC7-202ENST00000354334 NACADO15069 1562 aa19.38■□□□□ 0.69
HDAC7-202ENST00000354334 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
HDAC7-202ENST00000354334 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
HDAC7-202ENST00000354334 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
HDAC7-202ENST00000354334 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
HDAC7-202ENST00000354334 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
HDAC7-202ENST00000354334 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
HDAC7-202ENST00000354334 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
HDAC7-202ENST00000354334 FBLN2P98095 1184 aa18.99■□□□□ 0.63
HDAC7-202ENST00000354334 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
HDAC7-202ENST00000354334 ARID3CA6NKF2 412 aa18.95■□□□□ 0.62
HDAC7-202ENST00000354334 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.625e-6■■■■■ 29.2
HDAC7-202ENST00000354334 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
HDAC7-202ENST00000354334 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
HDAC7-202ENST00000354334 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
HDAC7-202ENST00000354334 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
HDAC7-202ENST00000354334 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-202ENST00000354334 NEFLP07196 543 aa18.86■□□□□ 0.61
HDAC7-202ENST00000354334 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
HDAC7-202ENST00000354334 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
HDAC7-202ENST00000354334 CLIP1P30622 1438 aa18.85■□□□□ 0.61
HDAC7-202ENST00000354334 EEA1Q15075 1411 aa18.82■□□□□ 0.6
HDAC7-202ENST00000354334 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
HDAC7-202ENST00000354334 SOGA1O94964 1423 aa18.79■□□□□ 0.6
HDAC7-202ENST00000354334 WIZO95785 1651 aa18.78■□□□□ 0.6
HDAC7-202ENST00000354334 GOLGA3Q08378 1498 aa18.77■□□□□ 0.59
HDAC7-202ENST00000354334 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
HDAC7-202ENST00000354334 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
HDAC7-202ENST00000354334 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
HDAC7-202ENST00000354334 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
HDAC7-202ENST00000354334 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
HDAC7-202ENST00000354334 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
HDAC7-202ENST00000354334 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
HDAC7-202ENST00000354334 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
HDAC7-202ENST00000354334 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
HDAC7-202ENST00000354334 CHIC2Q9UKJ5 165 aa18.54■□□□□ 0.56
HDAC7-202ENST00000354334 MTUS2Q5JR59 1369 aa18.51■□□□□ 0.55
HDAC7-202ENST00000354334 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
HDAC7-202ENST00000354334 ANP32CO43423 234 aa18.49■□□□□ 0.55
HDAC7-202ENST00000354334 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
HDAC7-202ENST00000354334 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
HDAC7-202ENST00000354334 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
HDAC7-202ENST00000354334 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
HDAC7-202ENST00000354334 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
HDAC7-202ENST00000354334 CUX2O14529 1486 aa18.43■□□□□ 0.54
HDAC7-202ENST00000354334 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
HDAC7-202ENST00000354334 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
HDAC7-202ENST00000354334 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
HDAC7-202ENST00000354334 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
HDAC7-202ENST00000354334 BCANQ96GW7 911 aa18.38■□□□□ 0.53
HDAC7-202ENST00000354334 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
HDAC7-202ENST00000354334 MIER1Q8N108 512 aa18.35■□□□□ 0.53
HDAC7-202ENST00000354334 RRP7BPQ9NSQ0 103 aa18.35■□□□□ 0.53
HDAC7-202ENST00000354334 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
HDAC7-202ENST00000354334 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-202ENST00000354334 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
HDAC7-202ENST00000354334 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
HDAC7-202ENST00000354334 RAPGEF2Q9Y4G8 1499 aa18.25■□□□□ 0.51
HDAC7-202ENST00000354334 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
HDAC7-202ENST00000354334 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
HDAC7-202ENST00000354334 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
HDAC7-202ENST00000354334 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
HDAC7-202ENST00000354334 SIN3AQ96ST3 1273 aa18.21■□□□□ 0.51
HDAC7-202ENST00000354334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
HDAC7-202ENST00000354334 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms