RNA–Protein interactions for RNA: ENST00000493418.1

HMGN2-209, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-209ENST00000493418 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
HMGN2-209ENST00000493418 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
HMGN2-209ENST00000493418 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
HMGN2-209ENST00000493418 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
HMGN2-209ENST00000493418 FOXD1Q16676 465 aa18.11■□□□□ 0.49
HMGN2-209ENST00000493418 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
HMGN2-209ENST00000493418 MSH5O43196 834 aa16.98■□□□□ 0.31
HMGN2-209ENST00000493418 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
HMGN2-209ENST00000493418 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
HMGN2-209ENST00000493418 ADRA2BP18089 450 aa16.87■□□□□ 0.29
HMGN2-209ENST00000493418 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
HMGN2-209ENST00000493418 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
HMGN2-209ENST00000493418 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
HMGN2-209ENST00000493418 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
HMGN2-209ENST00000493418 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
HMGN2-209ENST00000493418 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
HMGN2-209ENST00000493418 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.03
HMGN2-209ENST00000493418 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
HMGN2-209ENST00000493418 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
HMGN2-209ENST00000493418 CACNB1Q02641 598 aaPredicted RBP14.59□□□□□ -0.07
HMGN2-209ENST00000493418 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
HMGN2-209ENST00000493418 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
HMGN2-209ENST00000493418 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
HMGN2-209ENST00000493418 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
HMGN2-209ENST00000493418 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
HMGN2-209ENST00000493418 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
HMGN2-209ENST00000493418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.143e-13■■■□□ 16.2
HMGN2-209ENST00000493418 KCNA4P22459 653 aa14.03□□□□□ -0.16
HMGN2-209ENST00000493418 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
HMGN2-209ENST00000493418 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
HMGN2-209ENST00000493418 CAPN15O75808 1086 aa13.64□□□□□ -0.23
HMGN2-209ENST00000493418 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
HMGN2-209ENST00000493418 DSG3P32926 999 aa13.55□□□□□ -0.24
HMGN2-209ENST00000493418 APLP2Q06481 763 aa13.5□□□□□ -0.25
HMGN2-209ENST00000493418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
HMGN2-209ENST00000493418 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
HMGN2-209ENST00000493418 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
HMGN2-209ENST00000493418 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
HMGN2-209ENST00000493418 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
HMGN2-209ENST00000493418 ABCB7O75027 752 aa13.29□□□□□ -0.28
HMGN2-209ENST00000493418 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
HMGN2-209ENST00000493418 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
HMGN2-209ENST00000493418 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
HMGN2-209ENST00000493418 POLA2Q14181 598 aa13.05□□□□□ -0.32
HMGN2-209ENST00000493418 POTEHQ6S545 545 aa12.99□□□□□ -0.33
HMGN2-209ENST00000493418 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
HMGN2-209ENST00000493418 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
HMGN2-209ENST00000493418 ZBTB22O15209 634 aa12.88□□□□□ -0.35
HMGN2-209ENST00000493418 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
HMGN2-209ENST00000493418 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
HMGN2-209ENST00000493418 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
HMGN2-209ENST00000493418 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
HMGN2-209ENST00000493418 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
HMGN2-209ENST00000493418 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
HMGN2-209ENST00000493418 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
HMGN2-209ENST00000493418 FBLN2P98095 1184 aa12.48□□□□□ -0.41
HMGN2-209ENST00000493418 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.43
HMGN2-209ENST00000493418 SPDYE6P0CI01 402 aa12.4□□□□□ -0.43
HMGN2-209ENST00000493418 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.43
HMGN2-209ENST00000493418 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
HMGN2-209ENST00000493418 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
HMGN2-209ENST00000493418 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
HMGN2-209ENST00000493418 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
HMGN2-209ENST00000493418 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.44
HMGN2-209ENST00000493418 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.44
HMGN2-209ENST00000493418 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
HMGN2-209ENST00000493418 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
HMGN2-209ENST00000493418 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
HMGN2-209ENST00000493418 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
HMGN2-209ENST00000493418 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
HMGN2-209ENST00000493418 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
HMGN2-209ENST00000493418 HAX1O00165 279 aa12.15□□□□□ -0.46
HMGN2-209ENST00000493418 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
HMGN2-209ENST00000493418 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
HMGN2-209ENST00000493418 PRR29P0C7W0 189 aa11.98□□□□□ -0.49
HMGN2-209ENST00000493418 DCAF1Q9Y4B6 1507 aa11.98□□□□□ -0.49
HMGN2-209ENST00000493418 EVX2Q03828 476 aa11.96□□□□□ -0.49
HMGN2-209ENST00000493418 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
HMGN2-209ENST00000493418 C19orf67A6NJJ6 358 aa11.89□□□□□ -0.51
HMGN2-209ENST00000493418 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
HMGN2-209ENST00000493418 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
HMGN2-209ENST00000493418 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
HMGN2-209ENST00000493418 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
HMGN2-209ENST00000493418 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
HMGN2-209ENST00000493418 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
HMGN2-209ENST00000493418 GABBR2O75899 941 aa11.72□□□□□ -0.53
HMGN2-209ENST00000493418 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
HMGN2-209ENST00000493418 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
HMGN2-209ENST00000493418 NACADO15069 1562 aa11.59□□□□□ -0.55
HMGN2-209ENST00000493418 ABCC9O60706 1549 aa11.58□□□□□ -0.55
HMGN2-209ENST00000493418 CLCN6P51797 869 aa11.57□□□□□ -0.56
HMGN2-209ENST00000493418 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.56
HMGN2-209ENST00000493418 SCRIBQ14160 1630 aa11.5□□□□□ -0.57
HMGN2-209ENST00000493418 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
HMGN2-209ENST00000493418 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
HMGN2-209ENST00000493418 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGN2-209ENST00000493418 PROM2Q8N271 834 aa11.47□□□□□ -0.57
HMGN2-209ENST00000493418 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
HMGN2-209ENST00000493418 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
HMGN2-209ENST00000493418 LHX8Q68G74 356 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms