RNA–Protein interactions for RNA: ENST00000430901.1

SERF2-211, Transcript of small EDRK-rich factor 2, humanhuman

TSL 4

Gene SERF2, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-211ENST00000430901 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
SERF2-211ENST00000430901 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
SERF2-211ENST00000430901 ABCC9O60706 1549 aa30.32■■■□□ 2.44
SERF2-211ENST00000430901 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
SERF2-211ENST00000430901 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
SERF2-211ENST00000430901 NACADO15069 1562 aa29.33■■■□□ 2.29
SERF2-211ENST00000430901 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
SERF2-211ENST00000430901 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
SERF2-211ENST00000430901 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
SERF2-211ENST00000430901 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
SERF2-211ENST00000430901 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
SERF2-211ENST00000430901 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
SERF2-211ENST00000430901 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
SERF2-211ENST00000430901 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
SERF2-211ENST00000430901 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
SERF2-211ENST00000430901 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
SERF2-211ENST00000430901 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
SERF2-211ENST00000430901 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
SERF2-211ENST00000430901 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
SERF2-211ENST00000430901 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
SERF2-211ENST00000430901 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
SERF2-211ENST00000430901 SMARCA2P51531 1590 aa27.14■■□□□ 1.93
SERF2-211ENST00000430901 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
SERF2-211ENST00000430901 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
SERF2-211ENST00000430901 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
SERF2-211ENST00000430901 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
SERF2-211ENST00000430901 BAZ1BQ9UIG0 1483 aaKnown RBP26.97■■□□□ 1.91
SERF2-211ENST00000430901 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
SERF2-211ENST00000430901 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
SERF2-211ENST00000430901 WIZO95785 1651 aa26.86■■□□□ 1.89
SERF2-211ENST00000430901 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
SERF2-211ENST00000430901 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
SERF2-211ENST00000430901 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
SERF2-211ENST00000430901 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
SERF2-211ENST00000430901 NESP48681 1621 aa26.25■■□□□ 1.79
SERF2-211ENST00000430901 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
SERF2-211ENST00000430901 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
SERF2-211ENST00000430901 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
SERF2-211ENST00000430901 CFTRP13569 1480 aa26.17■■□□□ 1.78
SERF2-211ENST00000430901 FANCD2Q9BXW9 1451 aa26.02■■□□□ 1.76
SERF2-211ENST00000430901 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
SERF2-211ENST00000430901 PRDM2Q13029 1718 aa25.9■■□□□ 1.74
SERF2-211ENST00000430901 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
SERF2-211ENST00000430901 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
SERF2-211ENST00000430901 CUX2O14529 1486 aa25.75■■□□□ 1.71
SERF2-211ENST00000430901 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
SERF2-211ENST00000430901 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
SERF2-211ENST00000430901 WDR62O43379 1518 aa25.68■■□□□ 1.7
SERF2-211ENST00000430901 URB2Q14146 1524 aaKnown RBP25.66■■□□□ 1.7
SERF2-211ENST00000430901 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
SERF2-211ENST00000430901 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
SERF2-211ENST00000430901 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
SERF2-211ENST00000430901 CUX1P39880 1505 aa25.47■■□□□ 1.67
SERF2-211ENST00000430901 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
SERF2-211ENST00000430901 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
SERF2-211ENST00000430901 SOGA1O94964 1423 aa25.39■■□□□ 1.66
SERF2-211ENST00000430901 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
SERF2-211ENST00000430901 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
SERF2-211ENST00000430901 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
SERF2-211ENST00000430901 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
SERF2-211ENST00000430901 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
SERF2-211ENST00000430901 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
SERF2-211ENST00000430901 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
SERF2-211ENST00000430901 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
SERF2-211ENST00000430901 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
SERF2-211ENST00000430901 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
SERF2-211ENST00000430901 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.624e-9■■■■■ 47.1
SERF2-211ENST00000430901 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
SERF2-211ENST00000430901 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
SERF2-211ENST00000430901 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
SERF2-211ENST00000430901 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
SERF2-211ENST00000430901 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
SERF2-211ENST00000430901 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
SERF2-211ENST00000430901 FBLN2P98095 1184 aa24.96■■□□□ 1.59
SERF2-211ENST00000430901 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
SERF2-211ENST00000430901 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
SERF2-211ENST00000430901 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
SERF2-211ENST00000430901 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
SERF2-211ENST00000430901 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
SERF2-211ENST00000430901 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
SERF2-211ENST00000430901 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
SERF2-211ENST00000430901 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
SERF2-211ENST00000430901 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
SERF2-211ENST00000430901 EEA1Q15075 1411 aa24.82■■□□□ 1.56
SERF2-211ENST00000430901 IGF1RP08069 1367 aa24.81■■□□□ 1.56
SERF2-211ENST00000430901 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
SERF2-211ENST00000430901 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
SERF2-211ENST00000430901 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
SERF2-211ENST00000430901 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
SERF2-211ENST00000430901 CSRNP3Q8WYN3 585 aa24.71■■□□□ 1.55
SERF2-211ENST00000430901 CUL7Q14999 1698 aa24.71■■□□□ 1.55
SERF2-211ENST00000430901 CHD1O14646 1710 aa24.67■■□□□ 1.54
SERF2-211ENST00000430901 GRIN2AQ12879 1464 aa24.67■■□□□ 1.54
SERF2-211ENST00000430901 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
SERF2-211ENST00000430901 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
SERF2-211ENST00000430901 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
SERF2-211ENST00000430901 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
SERF2-211ENST00000430901 HRCP23327 699 aa24.53■■□□□ 1.52
SERF2-211ENST00000430901 NUP160Q12769 1436 aa24.52■■□□□ 1.52
SERF2-211ENST00000430901 KIF21BO75037 1637 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms