Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.36■■■□□ 2.29
CYP46A1Q9Y6A2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.36■■■□□ 2.29
CYP46A1Q9Y6A2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CYP46A1Q9Y6A2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.36■■■□□ 2.29
CYP46A1Q9Y6A2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CYP46A1Q9Y6A2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CYP46A1Q9Y6A2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CYP46A1Q9Y6A2 AC142472.1-201ENST00000612013 1741 ntBASIC29.34■■■□□ 2.29
CYP46A1Q9Y6A2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CYP46A1Q9Y6A2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CYP46A1Q9Y6A2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CYP46A1Q9Y6A2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CYP46A1Q9Y6A2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CYP46A1Q9Y6A2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.33■■■□□ 2.29
CYP46A1Q9Y6A2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.33■■■□□ 2.29
CYP46A1Q9Y6A2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.33■■■□□ 2.29
CYP46A1Q9Y6A2 AC091060.1-201ENST00000623524 1766 ntBASIC29.33■■■□□ 2.29
CYP46A1Q9Y6A2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.32■■■□□ 2.28
CYP46A1Q9Y6A2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 MIR219A2-201ENST00000608502 1504 ntBASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 AC148477.6-201ENST00000623746 465 ntBASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.31■■■□□ 2.28
CYP46A1Q9Y6A2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CYP46A1Q9Y6A2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.29■■■□□ 2.28
CYP46A1Q9Y6A2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CYP46A1Q9Y6A2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 HLA-V-202ENST00000446817 847 ntBASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 CR559946.2-201ENST00000623684 991 ntBASIC29.28■■■□□ 2.28
CYP46A1Q9Y6A2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.27■■■□□ 2.28
CYP46A1Q9Y6A2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CYP46A1Q9Y6A2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CYP46A1Q9Y6A2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CYP46A1Q9Y6A2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CYP46A1Q9Y6A2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CYP46A1Q9Y6A2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CYP46A1Q9Y6A2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CYP46A1Q9Y6A2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.25■■■□□ 2.27
CYP46A1Q9Y6A2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
CYP46A1Q9Y6A2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CYP46A1Q9Y6A2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CYP46A1Q9Y6A2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CYP46A1Q9Y6A2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CYP46A1Q9Y6A2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CYP46A1Q9Y6A2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.24■■■□□ 2.27
CYP46A1Q9Y6A2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
CYP46A1Q9Y6A2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CYP46A1Q9Y6A2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
CYP46A1Q9Y6A2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CYP46A1Q9Y6A2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CYP46A1Q9Y6A2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CYP46A1Q9Y6A2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 MIR3648-2-201ENST00000581792 180 ntBASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 MIR3648-1-201ENST00000615959 180 ntBASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.21■■■□□ 2.27
CYP46A1Q9Y6A2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.2■■■□□ 2.27
CYP46A1Q9Y6A2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
CYP46A1Q9Y6A2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CYP46A1Q9Y6A2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.2■■■□□ 2.26
CYP46A1Q9Y6A2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.2■■■□□ 2.26
CYP46A1Q9Y6A2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
CYP46A1Q9Y6A2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.19■■■□□ 2.26
CYP46A1Q9Y6A2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CYP46A1Q9Y6A2 AC145676.1-201ENST00000514988 2004 ntBASIC29.19■■■□□ 2.26
CYP46A1Q9Y6A2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CYP46A1Q9Y6A2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.18■■■□□ 2.26
CYP46A1Q9Y6A2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.18■■■□□ 2.26
CYP46A1Q9Y6A2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
CYP46A1Q9Y6A2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CYP46A1Q9Y6A2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CYP46A1Q9Y6A2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.17■■■□□ 2.26
CYP46A1Q9Y6A2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
CYP46A1Q9Y6A2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.17■■■□□ 2.26
CYP46A1Q9Y6A2 AC092803.2-201ENST00000564287 1899 ntBASIC29.17■■■□□ 2.26
CYP46A1Q9Y6A2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CYP46A1Q9Y6A2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CYP46A1Q9Y6A2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CYP46A1Q9Y6A2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CYP46A1Q9Y6A2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CYP46A1Q9Y6A2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CYP46A1Q9Y6A2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.14■■■□□ 2.26
CYP46A1Q9Y6A2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CYP46A1Q9Y6A2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.14■■■□□ 2.25
CYP46A1Q9Y6A2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CYP46A1Q9Y6A2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms