Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SIX2Q9NPC8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SIX2Q9NPC8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SIX2Q9NPC8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SIX2Q9NPC8 MIR219A2-201ENST00000608502 1504 ntBASIC26.71■■□□□ 1.87
SIX2Q9NPC8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.71■■□□□ 1.87
SIX2Q9NPC8 AC148477.6-201ENST00000623746 465 ntBASIC26.71■■□□□ 1.87
SIX2Q9NPC8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.7■■□□□ 1.87
SIX2Q9NPC8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SIX2Q9NPC8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SIX2Q9NPC8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.7■■□□□ 1.86
SIX2Q9NPC8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.7■■□□□ 1.86
SIX2Q9NPC8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SIX2Q9NPC8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SIX2Q9NPC8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SIX2Q9NPC8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SIX2Q9NPC8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SIX2Q9NPC8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SIX2Q9NPC8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SIX2Q9NPC8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
SIX2Q9NPC8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SIX2Q9NPC8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.65■■□□□ 1.86
SIX2Q9NPC8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SIX2Q9NPC8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SIX2Q9NPC8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SIX2Q9NPC8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SIX2Q9NPC8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.64■■□□□ 1.86
SIX2Q9NPC8 MIR3648-2-201ENST00000581792 180 ntBASIC26.63■■□□□ 1.85
SIX2Q9NPC8 MIR3648-1-201ENST00000615959 180 ntBASIC26.63■■□□□ 1.85
SIX2Q9NPC8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SIX2Q9NPC8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SIX2Q9NPC8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
SIX2Q9NPC8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SIX2Q9NPC8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SIX2Q9NPC8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SIX2Q9NPC8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.61■■□□□ 1.85
SIX2Q9NPC8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.61■■□□□ 1.85
SIX2Q9NPC8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SIX2Q9NPC8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.6■■□□□ 1.85
SIX2Q9NPC8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.6■■□□□ 1.85
SIX2Q9NPC8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.59■■□□□ 1.85
SIX2Q9NPC8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SIX2Q9NPC8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SIX2Q9NPC8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.58■■□□□ 1.85
SIX2Q9NPC8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.58■■□□□ 1.85
SIX2Q9NPC8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.58■■□□□ 1.84
SIX2Q9NPC8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SIX2Q9NPC8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SIX2Q9NPC8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
SIX2Q9NPC8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SIX2Q9NPC8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.56■■□□□ 1.84
SIX2Q9NPC8 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.56■■□□□ 1.84
SIX2Q9NPC8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SIX2Q9NPC8 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.56■■□□□ 1.84
SIX2Q9NPC8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SIX2Q9NPC8 AC145676.1-201ENST00000514988 2004 ntBASIC26.55■■□□□ 1.84
SIX2Q9NPC8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SIX2Q9NPC8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.55■■□□□ 1.84
SIX2Q9NPC8 AC016575.1-201ENST00000607026 382 ntBASIC26.55■■□□□ 1.84
SIX2Q9NPC8 AC092803.2-201ENST00000564287 1899 ntBASIC26.55■■□□□ 1.84
SIX2Q9NPC8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.55■■□□□ 1.84
SIX2Q9NPC8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SIX2Q9NPC8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX2Q9NPC8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX2Q9NPC8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX2Q9NPC8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SIX2Q9NPC8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SIX2Q9NPC8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SIX2Q9NPC8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SIX2Q9NPC8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms