Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CSNK1G1Q9HCP0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.16■■□□□ 1.78
CSNK1G1Q9HCP0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CSNK1G1Q9HCP0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSNK1G1Q9HCP0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CSNK1G1Q9HCP0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
CSNK1G1Q9HCP0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSNK1G1Q9HCP0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.13■■□□□ 1.77
CSNK1G1Q9HCP0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.13■■□□□ 1.77
CSNK1G1Q9HCP0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CSNK1G1Q9HCP0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.12■■□□□ 1.77
CSNK1G1Q9HCP0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSNK1G1Q9HCP0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSNK1G1Q9HCP0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CSNK1G1Q9HCP0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSNK1G1Q9HCP0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSNK1G1Q9HCP0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSNK1G1Q9HCP0 AC025884.2-201ENST00000553429 711 ntBASIC26.1■■□□□ 1.77
CSNK1G1Q9HCP0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSNK1G1Q9HCP0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CSNK1G1Q9HCP0 AL449106.1-201ENST00000608517 1980 ntBASIC26.09■■□□□ 1.77
CSNK1G1Q9HCP0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSNK1G1Q9HCP0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CSNK1G1Q9HCP0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.09■■□□□ 1.77
CSNK1G1Q9HCP0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.09■■□□□ 1.77
CSNK1G1Q9HCP0 ABHD17AP5-201ENST00000580133 923 ntBASIC26.08■■□□□ 1.77
CSNK1G1Q9HCP0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CSNK1G1Q9HCP0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.08■■□□□ 1.77
CSNK1G1Q9HCP0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
CSNK1G1Q9HCP0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.07■■□□□ 1.76
CSNK1G1Q9HCP0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 SMPD5-203ENST00000639008 1464 ntBASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.06■■□□□ 1.76
CSNK1G1Q9HCP0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 AL359504.2-201ENST00000605506 1601 ntBASIC26.05■■□□□ 1.76
CSNK1G1Q9HCP0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CSNK1G1Q9HCP0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 AC007029.1-201ENST00000604183 313 ntBASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.03■■□□□ 1.76
CSNK1G1Q9HCP0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSNK1G1Q9HCP0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.02■■□□□ 1.76
CSNK1G1Q9HCP0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSNK1G1Q9HCP0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.02■■□□□ 1.76
CSNK1G1Q9HCP0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSNK1G1Q9HCP0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSNK1G1Q9HCP0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26■■□□□ 1.75
CSNK1G1Q9HCP0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CSNK1G1Q9HCP0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSNK1G1Q9HCP0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSNK1G1Q9HCP0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSNK1G1Q9HCP0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.98■■□□□ 1.75
CSNK1G1Q9HCP0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CSNK1G1Q9HCP0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSNK1G1Q9HCP0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CSNK1G1Q9HCP0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.97■■□□□ 1.75
CSNK1G1Q9HCP0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSNK1G1Q9HCP0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
CSNK1G1Q9HCP0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSNK1G1Q9HCP0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.96■■□□□ 1.75
CSNK1G1Q9HCP0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSNK1G1Q9HCP0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CSNK1G1Q9HCP0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSNK1G1Q9HCP0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CSNK1G1Q9HCP0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSNK1G1Q9HCP0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CSNK1G1Q9HCP0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CSNK1G1Q9HCP0 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.94■■□□□ 1.74
CSNK1G1Q9HCP0 U85056.1-201ENST00000616429 682 ntBASIC25.94■■□□□ 1.74
CSNK1G1Q9HCP0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 RP9P-202ENST00000450133 1212 ntBASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 MIR3960-201ENST00000583311 91 ntBASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 NTF6A-201ENST00000591175 560 ntBASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSNK1G1Q9HCP0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.92■■□□□ 1.74
CSNK1G1Q9HCP0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CSNK1G1Q9HCP0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CSNK1G1Q9HCP0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms