Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CLPBQ9H078 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.83■■□□□ 1.57
CLPBQ9H078 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLPBQ9H078 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.83■■□□□ 1.56
CLPBQ9H078 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CLPBQ9H078 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CLPBQ9H078 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLPBQ9H078 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLPBQ9H078 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLPBQ9H078 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CLPBQ9H078 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLPBQ9H078 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLPBQ9H078 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.81■■□□□ 1.56
CLPBQ9H078 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CLPBQ9H078 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLPBQ9H078 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CLPBQ9H078 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CLPBQ9H078 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLPBQ9H078 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CLPBQ9H078 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CLPBQ9H078 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLPBQ9H078 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLPBQ9H078 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CLPBQ9H078 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.78■■□□□ 1.56
CLPBQ9H078 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLPBQ9H078 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLPBQ9H078 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.77■■□□□ 1.56
CLPBQ9H078 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.77■■□□□ 1.56
CLPBQ9H078 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLPBQ9H078 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CLPBQ9H078 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CLPBQ9H078 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CLPBQ9H078 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.75■■□□□ 1.55
CLPBQ9H078 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CLPBQ9H078 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CLPBQ9H078 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLPBQ9H078 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.75■■□□□ 1.55
CLPBQ9H078 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CLPBQ9H078 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.75■■□□□ 1.55
CLPBQ9H078 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CLPBQ9H078 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
CLPBQ9H078 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.74■■□□□ 1.55
CLPBQ9H078 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLPBQ9H078 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLPBQ9H078 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CLPBQ9H078 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.73■■□□□ 1.55
CLPBQ9H078 AC092296.2-201ENST00000589470 999 ntBASIC24.73■■□□□ 1.55
CLPBQ9H078 NTF6A-201ENST00000591175 560 ntBASIC24.73■■□□□ 1.55
CLPBQ9H078 AL121749.1-202ENST00000609313 2153 ntBASIC24.73■■□□□ 1.55
CLPBQ9H078 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLPBQ9H078 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLPBQ9H078 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLPBQ9H078 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.71■■□□□ 1.55
CLPBQ9H078 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.71■■□□□ 1.55
CLPBQ9H078 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CLPBQ9H078 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.7■■□□□ 1.55
CLPBQ9H078 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLPBQ9H078 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLPBQ9H078 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.7■■□□□ 1.54
CLPBQ9H078 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLPBQ9H078 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLPBQ9H078 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.69■■□□□ 1.54
CLPBQ9H078 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.69■■□□□ 1.54
CLPBQ9H078 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.68■■□□□ 1.54
CLPBQ9H078 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CLPBQ9H078 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
CLPBQ9H078 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLPBQ9H078 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.67■■□□□ 1.54
CLPBQ9H078 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLPBQ9H078 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.67■■□□□ 1.54
CLPBQ9H078 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CLPBQ9H078 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLPBQ9H078 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLPBQ9H078 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLPBQ9H078 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLPBQ9H078 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLPBQ9H078 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLPBQ9H078 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
CLPBQ9H078 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.66■■□□□ 1.54
CLPBQ9H078 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLPBQ9H078 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLPBQ9H078 AC126177.7-201ENST00000547904 679 ntBASIC24.65■■□□□ 1.54
CLPBQ9H078 U85056.1-201ENST00000616429 682 ntBASIC24.65■■□□□ 1.54
CLPBQ9H078 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.64■■□□□ 1.54
CLPBQ9H078 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CLPBQ9H078 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLPBQ9H078 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CLPBQ9H078 ECEL1P2-201ENST00000461596 1295 ntBASIC24.64■■□□□ 1.54
CLPBQ9H078 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.64■■□□□ 1.54
CLPBQ9H078 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.64■■□□□ 1.53
CLPBQ9H078 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
CLPBQ9H078 WHAMMP3-201ENST00000611636 1609 ntBASIC24.64■■□□□ 1.53
CLPBQ9H078 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLPBQ9H078 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLPBQ9H078 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLPBQ9H078 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.63■■□□□ 1.53
CLPBQ9H078 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLPBQ9H078 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CLPBQ9H078 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.63■■□□□ 1.53
CLPBQ9H078 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms