Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.08■■□□□ 1.77
CALR3Q96L12 AC021231.2-201ENST00000594613 730 ntBASIC26.08■■□□□ 1.77
CALR3Q96L12 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CALR3Q96L12 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CALR3Q96L12 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
CALR3Q96L12 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
CALR3Q96L12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CALR3Q96L12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.07■■□□□ 1.76
CALR3Q96L12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CALR3Q96L12 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CALR3Q96L12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.07■■□□□ 1.76
CALR3Q96L12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CALR3Q96L12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CALR3Q96L12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CALR3Q96L12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.06■■□□□ 1.76
CALR3Q96L12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CALR3Q96L12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
CALR3Q96L12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.06■■□□□ 1.76
CALR3Q96L12 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CALR3Q96L12 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CALR3Q96L12 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CALR3Q96L12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CALR3Q96L12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CALR3Q96L12 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.05■■□□□ 1.76
CALR3Q96L12 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CALR3Q96L12 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CALR3Q96L12 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.03■■□□□ 1.76
CALR3Q96L12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CALR3Q96L12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CALR3Q96L12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CALR3Q96L12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CALR3Q96L12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.02■■□□□ 1.76
CALR3Q96L12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CALR3Q96L12 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CALR3Q96L12 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26■■□□□ 1.75
CALR3Q96L12 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
CALR3Q96L12 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CALR3Q96L12 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CALR3Q96L12 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CALR3Q96L12 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26■■□□□ 1.75
CALR3Q96L12 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26■■□□□ 1.75
CALR3Q96L12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CALR3Q96L12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.98■■□□□ 1.75
CALR3Q96L12 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CALR3Q96L12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.98■■□□□ 1.75
CALR3Q96L12 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.98■■□□□ 1.75
CALR3Q96L12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CALR3Q96L12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CALR3Q96L12 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.98■■□□□ 1.75
CALR3Q96L12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CALR3Q96L12 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CALR3Q96L12 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CALR3Q96L12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CALR3Q96L12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
CALR3Q96L12 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CALR3Q96L12 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CALR3Q96L12 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.95■■□□□ 1.74
CALR3Q96L12 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.94■■□□□ 1.74
CALR3Q96L12 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CALR3Q96L12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CALR3Q96L12 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.94■■□□□ 1.74
CALR3Q96L12 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CALR3Q96L12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CALR3Q96L12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CALR3Q96L12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CALR3Q96L12 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CALR3Q96L12 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.92■■□□□ 1.74
CALR3Q96L12 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CALR3Q96L12 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CALR3Q96L12 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CALR3Q96L12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CALR3Q96L12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CALR3Q96L12 LINC01971-201ENST00000617888 1048 ntBASIC25.91■■□□□ 1.74
CALR3Q96L12 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
CALR3Q96L12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CALR3Q96L12 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
CALR3Q96L12 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.9■■□□□ 1.74
CALR3Q96L12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.9■■□□□ 1.74
CALR3Q96L12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CALR3Q96L12 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CALR3Q96L12 AC008813.1-201ENST00000536597 885 ntBASIC25.9■■□□□ 1.74
CALR3Q96L12 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.9■■□□□ 1.74
CALR3Q96L12 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CALR3Q96L12 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CALR3Q96L12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CALR3Q96L12 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CALR3Q96L12 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CALR3Q96L12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.89■■□□□ 1.73
CALR3Q96L12 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CALR3Q96L12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms