Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LSMEM1Q8N8F7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 ABHD17AP4-201ENST00000411545 909 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AC148477.6-201ENST00000623746 465 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 AC142472.1-201ENST00000612013 1741 ntBASIC22.6■■□□□ 1.21
LSMEM1Q8N8F7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LSMEM1Q8N8F7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LSMEM1Q8N8F7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LSMEM1Q8N8F7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
LSMEM1Q8N8F7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 MIR219A2-201ENST00000608502 1504 ntBASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LSMEM1Q8N8F7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.55■■□□□ 1.2
LSMEM1Q8N8F7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 AC091060.1-201ENST00000623524 1766 ntBASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LSMEM1Q8N8F7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LSMEM1Q8N8F7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 CR559946.2-201ENST00000623684 991 ntBASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LSMEM1Q8N8F7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.51■■□□□ 1.19
LSMEM1Q8N8F7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 HLA-V-202ENST00000446817 847 ntBASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LSMEM1Q8N8F7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LSMEM1Q8N8F7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.48■■□□□ 1.19
LSMEM1Q8N8F7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LSMEM1Q8N8F7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 MIR3648-2-201ENST00000581792 180 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 MIR3648-1-201ENST00000615959 180 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 AC145676.1-201ENST00000514988 2004 ntBASIC22.47■■□□□ 1.19
LSMEM1Q8N8F7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LSMEM1Q8N8F7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LSMEM1Q8N8F7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.45■■□□□ 1.19
LSMEM1Q8N8F7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.45■■□□□ 1.18
LSMEM1Q8N8F7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms