Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 MIR4449-201ENST00000578365 66 ntBASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
C12orf56Q8IXR9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
C12orf56Q8IXR9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
C12orf56Q8IXR9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
C12orf56Q8IXR9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
C12orf56Q8IXR9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.05■■□□□ 1.92
C12orf56Q8IXR9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
C12orf56Q8IXR9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
C12orf56Q8IXR9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
C12orf56Q8IXR9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
C12orf56Q8IXR9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
C12orf56Q8IXR9 AL359258.2-201ENST00000564063 1566 ntBASIC27.03■■□□□ 1.92
C12orf56Q8IXR9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 AC142472.1-201ENST00000612013 1741 ntBASIC27.02■■□□□ 1.92
C12orf56Q8IXR9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 AC126177.7-201ENST00000547904 679 ntBASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.01■■□□□ 1.91
C12orf56Q8IXR9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27■■□□□ 1.91
C12orf56Q8IXR9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27■■□□□ 1.91
C12orf56Q8IXR9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27■■□□□ 1.91
C12orf56Q8IXR9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
C12orf56Q8IXR9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27■■□□□ 1.91
C12orf56Q8IXR9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
C12orf56Q8IXR9 AP004609.3-201ENST00000610705 1884 ntBASIC26.99■■□□□ 1.91
C12orf56Q8IXR9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.98■■□□□ 1.91
C12orf56Q8IXR9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
C12orf56Q8IXR9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
C12orf56Q8IXR9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
C12orf56Q8IXR9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
C12orf56Q8IXR9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
C12orf56Q8IXR9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.96■■□□□ 1.91
C12orf56Q8IXR9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
C12orf56Q8IXR9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
C12orf56Q8IXR9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
C12orf56Q8IXR9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
C12orf56Q8IXR9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
C12orf56Q8IXR9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
C12orf56Q8IXR9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
C12orf56Q8IXR9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
C12orf56Q8IXR9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
C12orf56Q8IXR9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
C12orf56Q8IXR9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
C12orf56Q8IXR9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
C12orf56Q8IXR9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.94■■□□□ 1.9
C12orf56Q8IXR9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
C12orf56Q8IXR9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.93■■□□□ 1.9
C12orf56Q8IXR9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.93■■□□□ 1.9
C12orf56Q8IXR9 AC060814.1-201ENST00000554326 538 ntBASIC26.93■■□□□ 1.9
C12orf56Q8IXR9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
C12orf56Q8IXR9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
C12orf56Q8IXR9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.92■■□□□ 1.9
C12orf56Q8IXR9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
C12orf56Q8IXR9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
C12orf56Q8IXR9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
C12orf56Q8IXR9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
C12orf56Q8IXR9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
C12orf56Q8IXR9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
C12orf56Q8IXR9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
C12orf56Q8IXR9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
C12orf56Q8IXR9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
C12orf56Q8IXR9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
C12orf56Q8IXR9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
C12orf56Q8IXR9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
C12orf56Q8IXR9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
C12orf56Q8IXR9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
C12orf56Q8IXR9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
C12orf56Q8IXR9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
C12orf56Q8IXR9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
C12orf56Q8IXR9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
C12orf56Q8IXR9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.88■■□□□ 1.89
C12orf56Q8IXR9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
C12orf56Q8IXR9 AL157400.5-201ENST00000507624 621 ntBASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 AL359504.2-201ENST00000605506 1601 ntBASIC26.87■■□□□ 1.89
C12orf56Q8IXR9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
C12orf56Q8IXR9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
C12orf56Q8IXR9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
C12orf56Q8IXR9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms