Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.69■■■□□ 2.18
KRT40Q6A162 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.69■■■□□ 2.18
KRT40Q6A162 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
KRT40Q6A162 MIR219A2-201ENST00000608502 1504 ntBASIC28.69■■■□□ 2.18
KRT40Q6A162 AC148477.6-201ENST00000623746 465 ntBASIC28.68■■■□□ 2.18
KRT40Q6A162 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.68■■■□□ 2.18
KRT40Q6A162 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.67■■■□□ 2.18
KRT40Q6A162 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KRT40Q6A162 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.67■■■□□ 2.18
KRT40Q6A162 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KRT40Q6A162 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.66■■■□□ 2.18
KRT40Q6A162 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KRT40Q6A162 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KRT40Q6A162 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KRT40Q6A162 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.66■■■□□ 2.18
KRT40Q6A162 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
KRT40Q6A162 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
KRT40Q6A162 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.65■■■□□ 2.18
KRT40Q6A162 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
KRT40Q6A162 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
KRT40Q6A162 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
KRT40Q6A162 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
KRT40Q6A162 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
KRT40Q6A162 RARRES2P2-201ENST00000394842 485 ntBASIC28.62■■■□□ 2.17
KRT40Q6A162 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
KRT40Q6A162 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
KRT40Q6A162 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
KRT40Q6A162 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
KRT40Q6A162 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
KRT40Q6A162 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.61■■■□□ 2.17
KRT40Q6A162 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
KRT40Q6A162 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
KRT40Q6A162 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.61■■■□□ 2.17
KRT40Q6A162 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
KRT40Q6A162 AP004609.3-201ENST00000610705 1884 ntBASIC28.61■■■□□ 2.17
KRT40Q6A162 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
KRT40Q6A162 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.6■■■□□ 2.17
KRT40Q6A162 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
KRT40Q6A162 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.59■■■□□ 2.17
KRT40Q6A162 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
KRT40Q6A162 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.59■■■□□ 2.17
KRT40Q6A162 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
KRT40Q6A162 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
KRT40Q6A162 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
KRT40Q6A162 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.57■■■□□ 2.16
KRT40Q6A162 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
KRT40Q6A162 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
KRT40Q6A162 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
KRT40Q6A162 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
KRT40Q6A162 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
KRT40Q6A162 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.56■■■□□ 2.16
KRT40Q6A162 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
KRT40Q6A162 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
KRT40Q6A162 ABHD17AP5-201ENST00000580133 923 ntBASIC28.55■■■□□ 2.16
KRT40Q6A162 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
KRT40Q6A162 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
KRT40Q6A162 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.54■■■□□ 2.16
KRT40Q6A162 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
KRT40Q6A162 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
KRT40Q6A162 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
KRT40Q6A162 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
KRT40Q6A162 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
KRT40Q6A162 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
KRT40Q6A162 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.53■■■□□ 2.16
KRT40Q6A162 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
KRT40Q6A162 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.53■■■□□ 2.16
KRT40Q6A162 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.53■■■□□ 2.16
KRT40Q6A162 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.53■■■□□ 2.16
KRT40Q6A162 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
KRT40Q6A162 AC142472.1-201ENST00000612013 1741 ntBASIC28.52■■■□□ 2.16
KRT40Q6A162 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
KRT40Q6A162 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.52■■■□□ 2.16
KRT40Q6A162 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
KRT40Q6A162 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
KRT40Q6A162 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
KRT40Q6A162 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
KRT40Q6A162 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KRT40Q6A162 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.51■■■□□ 2.15
KRT40Q6A162 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
KRT40Q6A162 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
KRT40Q6A162 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.5■■■□□ 2.15
KRT40Q6A162 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.49■■■□□ 2.15
KRT40Q6A162 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.48■■■□□ 2.15
KRT40Q6A162 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.48■■■□□ 2.15
KRT40Q6A162 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.48■■■□□ 2.15
KRT40Q6A162 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
KRT40Q6A162 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.48■■■□□ 2.15
KRT40Q6A162 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms