Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDKAL1Q5VV42 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDKAL1Q5VV42 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.18■■□□□ 1.94
CDKAL1Q5VV42 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDKAL1Q5VV42 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDKAL1Q5VV42 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 DUX4L29-201ENST00000425409 679 ntBASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
CDKAL1Q5VV42 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CDKAL1Q5VV42 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDKAL1Q5VV42 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.15■■□□□ 1.94
CDKAL1Q5VV42 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CDKAL1Q5VV42 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.15■■□□□ 1.94
CDKAL1Q5VV42 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDKAL1Q5VV42 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CDKAL1Q5VV42 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.14■■□□□ 1.94
CDKAL1Q5VV42 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CDKAL1Q5VV42 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
CDKAL1Q5VV42 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.14■■□□□ 1.93
CDKAL1Q5VV42 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.14■■□□□ 1.93
CDKAL1Q5VV42 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.13■■□□□ 1.93
CDKAL1Q5VV42 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDKAL1Q5VV42 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.13■■□□□ 1.93
CDKAL1Q5VV42 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CDKAL1Q5VV42 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDKAL1Q5VV42 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
CDKAL1Q5VV42 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDKAL1Q5VV42 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.11■■□□□ 1.93
CDKAL1Q5VV42 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CDKAL1Q5VV42 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CDKAL1Q5VV42 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CDKAL1Q5VV42 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CDKAL1Q5VV42 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CDKAL1Q5VV42 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.09■■□□□ 1.93
CDKAL1Q5VV42 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDKAL1Q5VV42 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
CDKAL1Q5VV42 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CDKAL1Q5VV42 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CDKAL1Q5VV42 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.08■■□□□ 1.93
CDKAL1Q5VV42 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CDKAL1Q5VV42 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.07■■□□□ 1.92
CDKAL1Q5VV42 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDKAL1Q5VV42 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.06■■□□□ 1.92
CDKAL1Q5VV42 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.06■■□□□ 1.92
CDKAL1Q5VV42 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
CDKAL1Q5VV42 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDKAL1Q5VV42 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDKAL1Q5VV42 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CDKAL1Q5VV42 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDKAL1Q5VV42 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDKAL1Q5VV42 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDKAL1Q5VV42 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDKAL1Q5VV42 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDKAL1Q5VV42 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDKAL1Q5VV42 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CDKAL1Q5VV42 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDKAL1Q5VV42 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.02■■□□□ 1.92
CDKAL1Q5VV42 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDKAL1Q5VV42 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDKAL1Q5VV42 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDKAL1Q5VV42 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CDKAL1Q5VV42 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.01■■□□□ 1.91
CDKAL1Q5VV42 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.01■■□□□ 1.91
CDKAL1Q5VV42 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDKAL1Q5VV42 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CDKAL1Q5VV42 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27■■□□□ 1.91
CDKAL1Q5VV42 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDKAL1Q5VV42 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CDKAL1Q5VV42 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDKAL1Q5VV42 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.99■■□□□ 1.91
CDKAL1Q5VV42 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CDKAL1Q5VV42 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDKAL1Q5VV42 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDKAL1Q5VV42 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.98■■□□□ 1.91
CDKAL1Q5VV42 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
CDKAL1Q5VV42 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.98■■□□□ 1.91
CDKAL1Q5VV42 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDKAL1Q5VV42 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 ERN1-208ENST00000606895 2068 ntBASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDKAL1Q5VV42 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 LINC01971-201ENST00000617888 1048 ntBASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDKAL1Q5VV42 AC010501.1-201ENST00000606270 1962 ntBASIC26.95■■□□□ 1.91
CDKAL1Q5VV42 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms