Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 RPS2P35-201ENST00000443417 897 ntBASIC18.7■□□□□ 0.58
HIST1H1AQ02539 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST1H1AQ02539 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1AQ02539 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1AQ02539 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.69■□□□□ 0.58
HIST1H1AQ02539 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1AQ02539 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H1AQ02539 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HIST1H1AQ02539 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST1H1AQ02539 AL449106.1-201ENST00000608517 1980 ntBASIC18.68■□□□□ 0.58
HIST1H1AQ02539 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H1AQ02539 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.68■□□□□ 0.58
HIST1H1AQ02539 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HIST1H1AQ02539 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H1AQ02539 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1AQ02539 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST1H1AQ02539 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H1AQ02539 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H1AQ02539 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1AQ02539 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1AQ02539 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H1AQ02539 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H1AQ02539 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H1AQ02539 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H1AQ02539 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HIST1H1AQ02539 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H1AQ02539 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H1AQ02539 AC091060.1-201ENST00000623524 1766 ntBASIC18.64■□□□□ 0.57
HIST1H1AQ02539 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H1AQ02539 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H1AQ02539 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H1AQ02539 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H1AQ02539 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H1AQ02539 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1AQ02539 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST1H1AQ02539 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST1H1AQ02539 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H1AQ02539 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.62■□□□□ 0.57
HIST1H1AQ02539 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H1AQ02539 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
HIST1H1AQ02539 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H1AQ02539 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HIST1H1AQ02539 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1AQ02539 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H1AQ02539 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HIST1H1AQ02539 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 AC145676.1-201ENST00000514988 2004 ntBASIC18.58■□□□□ 0.56
HIST1H1AQ02539 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H1AQ02539 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H1AQ02539 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H1AQ02539 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms