Protein–RNA interactions for Protein: P61587

RND3, Rho-related GTP-binding protein RhoE, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RND3P61587 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.33■□□□□ 0.85
RND3P61587 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RND3P61587 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.32■□□□□ 0.84
RND3P61587 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RND3P61587 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RND3P61587 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RND3P61587 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RND3P61587 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.32■□□□□ 0.84
RND3P61587 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.32■□□□□ 0.84
RND3P61587 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.31■□□□□ 0.84
RND3P61587 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.31■□□□□ 0.84
RND3P61587 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RND3P61587 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.31■□□□□ 0.84
RND3P61587 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RND3P61587 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.31■□□□□ 0.84
RND3P61587 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RND3P61587 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RND3P61587 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RND3P61587 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RND3P61587 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RND3P61587 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RND3P61587 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
RND3P61587 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RND3P61587 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RND3P61587 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RND3P61587 SUZ12P1-203ENST00000578195 985 ntBASIC20.29■□□□□ 0.84
RND3P61587 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.29■□□□□ 0.84
RND3P61587 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RND3P61587 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RND3P61587 AC093323.1-202ENST00000635031 2045 ntBASIC20.28■□□□□ 0.84
RND3P61587 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RND3P61587 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RND3P61587 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.28■□□□□ 0.84
RND3P61587 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RND3P61587 WHAMMP3-201ENST00000611636 1609 ntBASIC20.27■□□□□ 0.84
RND3P61587 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RND3P61587 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RND3P61587 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RND3P61587 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RND3P61587 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RND3P61587 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.26■□□□□ 0.83
RND3P61587 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RND3P61587 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.26■□□□□ 0.83
RND3P61587 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RND3P61587 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
RND3P61587 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.25■□□□□ 0.83
RND3P61587 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.25■□□□□ 0.83
RND3P61587 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RND3P61587 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RND3P61587 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.24■□□□□ 0.83
RND3P61587 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RND3P61587 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RND3P61587 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RND3P61587 AC110285.7-201ENST00000624417 1536 ntBASIC20.23■□□□□ 0.83
RND3P61587 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.23■□□□□ 0.83
RND3P61587 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RND3P61587 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RND3P61587 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RND3P61587 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RND3P61587 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RND3P61587 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.22■□□□□ 0.83
RND3P61587 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RND3P61587 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RND3P61587 DUX4L28-201ENST00000623687 678 ntBASIC20.22■□□□□ 0.83
RND3P61587 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RND3P61587 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RND3P61587 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RND3P61587 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RND3P61587 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RND3P61587 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RND3P61587 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
RND3P61587 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RND3P61587 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
RND3P61587 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RND3P61587 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RND3P61587 AC010501.1-201ENST00000606270 1962 ntBASIC20.2■□□□□ 0.82
RND3P61587 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RND3P61587 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RND3P61587 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RND3P61587 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RND3P61587 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RND3P61587 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RND3P61587 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.18■□□□□ 0.82
RND3P61587 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RND3P61587 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
RND3P61587 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RND3P61587 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RND3P61587 ERN1-208ENST00000606895 2068 ntBASIC20.17■□□□□ 0.82
RND3P61587 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.17■□□□□ 0.82
RND3P61587 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RND3P61587 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.17■□□□□ 0.82
RND3P61587 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.16■□□□□ 0.82
RND3P61587 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RND3P61587 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.16■□□□□ 0.82
RND3P61587 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms