Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM50BP56557 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
TMEM50BP56557 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM50BP56557 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.94■□□□□ 0.94
TMEM50BP56557 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.94■□□□□ 0.94
TMEM50BP56557 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM50BP56557 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TMEM50BP56557 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM50BP56557 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.93■□□□□ 0.94
TMEM50BP56557 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM50BP56557 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM50BP56557 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM50BP56557 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TMEM50BP56557 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM50BP56557 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM50BP56557 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM50BP56557 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM50BP56557 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM50BP56557 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM50BP56557 WHAMMP3-201ENST00000611636 1609 ntBASIC20.9■□□□□ 0.94
TMEM50BP56557 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM50BP56557 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM50BP56557 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM50BP56557 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.89■□□□□ 0.94
TMEM50BP56557 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM50BP56557 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM50BP56557 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM50BP56557 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM50BP56557 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM50BP56557 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM50BP56557 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM50BP56557 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TMEM50BP56557 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM50BP56557 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM50BP56557 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM50BP56557 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM50BP56557 AC087741.3-201ENST00000624270 1347 ntBASIC20.88■□□□□ 0.93
TMEM50BP56557 AP006261.1-201ENST00000584783 668 ntBASIC20.88■□□□□ 0.93
TMEM50BP56557 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM50BP56557 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM50BP56557 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM50BP56557 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM50BP56557 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM50BP56557 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.86■□□□□ 0.93
TMEM50BP56557 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM50BP56557 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM50BP56557 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.85■□□□□ 0.93
TMEM50BP56557 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TMEM50BP56557 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM50BP56557 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM50BP56557 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM50BP56557 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
TMEM50BP56557 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
TMEM50BP56557 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
TMEM50BP56557 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM50BP56557 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM50BP56557 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM50BP56557 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM50BP56557 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM50BP56557 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.83■□□□□ 0.92
TMEM50BP56557 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM50BP56557 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM50BP56557 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM50BP56557 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TMEM50BP56557 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TMEM50BP56557 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM50BP56557 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM50BP56557 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM50BP56557 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM50BP56557 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM50BP56557 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM50BP56557 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM50BP56557 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM50BP56557 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.8■□□□□ 0.92
TMEM50BP56557 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMEM50BP56557 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM50BP56557 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TMEM50BP56557 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM50BP56557 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM50BP56557 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM50BP56557 AC093323.1-202ENST00000635031 2045 ntBASIC20.78■□□□□ 0.92
TMEM50BP56557 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms