Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC008813.1-201ENST00000536597 885 ntBASIC24.49■■□□□ 1.51
CDKN2DP55273 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.49■■□□□ 1.51
CDKN2DP55273 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.49■■□□□ 1.51
CDKN2DP55273 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDKN2DP55273 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.48■■□□□ 1.51
CDKN2DP55273 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.48■■□□□ 1.51
CDKN2DP55273 HLA-V-202ENST00000446817 847 ntBASIC24.48■■□□□ 1.51
CDKN2DP55273 AC142472.1-201ENST00000612013 1741 ntBASIC24.48■■□□□ 1.51
CDKN2DP55273 CR559946.2-201ENST00000623684 991 ntBASIC24.48■■□□□ 1.51
CDKN2DP55273 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDKN2DP55273 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
CDKN2DP55273 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.47■■□□□ 1.51
CDKN2DP55273 MIR219A2-201ENST00000608502 1504 ntBASIC24.47■■□□□ 1.51
CDKN2DP55273 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDKN2DP55273 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CDKN2DP55273 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDKN2DP55273 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDKN2DP55273 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.45■■□□□ 1.5
CDKN2DP55273 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.45■■□□□ 1.5
CDKN2DP55273 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.44■■□□□ 1.5
CDKN2DP55273 AC148477.6-201ENST00000623746 465 ntBASIC24.44■■□□□ 1.5
CDKN2DP55273 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDKN2DP55273 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.43■■□□□ 1.5
CDKN2DP55273 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.43■■□□□ 1.5
CDKN2DP55273 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.43■■□□□ 1.5
CDKN2DP55273 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDKN2DP55273 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
CDKN2DP55273 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.42■■□□□ 1.5
CDKN2DP55273 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDKN2DP55273 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDKN2DP55273 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDKN2DP55273 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.41■■□□□ 1.5
CDKN2DP55273 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDKN2DP55273 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CDKN2DP55273 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.4■■□□□ 1.5
CDKN2DP55273 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDKN2DP55273 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CDKN2DP55273 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.4■■□□□ 1.5
CDKN2DP55273 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDKN2DP55273 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
CDKN2DP55273 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
CDKN2DP55273 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDKN2DP55273 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
CDKN2DP55273 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
CDKN2DP55273 MIR3648-2-201ENST00000581792 180 ntBASIC24.39■■□□□ 1.49
CDKN2DP55273 MIR3648-1-201ENST00000615959 180 ntBASIC24.39■■□□□ 1.49
CDKN2DP55273 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDKN2DP55273 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.38■■□□□ 1.49
CDKN2DP55273 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDKN2DP55273 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.37■■□□□ 1.49
CDKN2DP55273 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.37■■□□□ 1.49
CDKN2DP55273 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDKN2DP55273 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.37■■□□□ 1.49
CDKN2DP55273 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDKN2DP55273 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.36■■□□□ 1.49
CDKN2DP55273 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CDKN2DP55273 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.36■■□□□ 1.49
CDKN2DP55273 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.36■■□□□ 1.49
CDKN2DP55273 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDKN2DP55273 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDKN2DP55273 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDKN2DP55273 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.35■■□□□ 1.49
CDKN2DP55273 AC145676.1-201ENST00000514988 2004 ntBASIC24.35■■□□□ 1.49
CDKN2DP55273 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDKN2DP55273 AC092803.2-201ENST00000564287 1899 ntBASIC24.34■■□□□ 1.49
CDKN2DP55273 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.34■■□□□ 1.49
CDKN2DP55273 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.34■■□□□ 1.49
CDKN2DP55273 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDKN2DP55273 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDKN2DP55273 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDKN2DP55273 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CDKN2DP55273 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDKN2DP55273 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.33■■□□□ 1.49
CDKN2DP55273 AC016575.1-201ENST00000607026 382 ntBASIC24.33■■□□□ 1.49
CDKN2DP55273 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CDKN2DP55273 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CDKN2DP55273 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDKN2DP55273 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDKN2DP55273 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
CDKN2DP55273 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDKN2DP55273 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDKN2DP55273 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDKN2DP55273 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms