Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDX1P52945 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDX1P52945 AL359258.2-201ENST00000564063 1566 ntBASIC24.08■■□□□ 1.44
PDX1P52945 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDX1P52945 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDX1P52945 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PDX1P52945 AC133552.2-201ENST00000619106 1032 ntBASIC24.06■■□□□ 1.44
PDX1P52945 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDX1P52945 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.05■■□□□ 1.44
PDX1P52945 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDX1P52945 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PDX1P52945 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
PDX1P52945 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PDX1P52945 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.04■■□□□ 1.44
PDX1P52945 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
PDX1P52945 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PDX1P52945 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PDX1P52945 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.04■■□□□ 1.44
PDX1P52945 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.04■■□□□ 1.44
PDX1P52945 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.04■■□□□ 1.44
PDX1P52945 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PDX1P52945 SMPD5-203ENST00000639008 1464 ntBASIC24.03■■□□□ 1.44
PDX1P52945 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PDX1P52945 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.02■■□□□ 1.44
PDX1P52945 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PDX1P52945 DUX4L18-201ENST00000553347 1267 ntBASIC24.02■■□□□ 1.44
PDX1P52945 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.02■■□□□ 1.44
PDX1P52945 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
PDX1P52945 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PDX1P52945 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
PDX1P52945 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.43
PDX1P52945 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
PDX1P52945 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PDX1P52945 AC025884.2-201ENST00000553429 711 ntBASIC24.01■■□□□ 1.43
PDX1P52945 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PDX1P52945 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PDX1P52945 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDX1P52945 AC026202.3-201ENST00000600805 1127 ntBASIC24■■□□□ 1.43
PDX1P52945 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24■■□□□ 1.43
PDX1P52945 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24■■□□□ 1.43
PDX1P52945 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PDX1P52945 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.99■■□□□ 1.43
PDX1P52945 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.99■■□□□ 1.43
PDX1P52945 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.99■■□□□ 1.43
PDX1P52945 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.99■■□□□ 1.43
PDX1P52945 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.99■■□□□ 1.43
PDX1P52945 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDX1P52945 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PDX1P52945 DRD5P2-201ENST00000421395 2012 ntBASIC23.98■■□□□ 1.43
PDX1P52945 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PDX1P52945 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PDX1P52945 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.98■■□□□ 1.43
PDX1P52945 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.97■■□□□ 1.43
PDX1P52945 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PDX1P52945 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PDX1P52945 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDX1P52945 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PDX1P52945 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PDX1P52945 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDX1P52945 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDX1P52945 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDX1P52945 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PDX1P52945 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
PDX1P52945 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.96■■□□□ 1.43
PDX1P52945 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.95■■□□□ 1.42
PDX1P52945 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.95■■□□□ 1.42
PDX1P52945 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.95■■□□□ 1.42
PDX1P52945 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PDX1P52945 AC142086.6-201ENST00000621154 1765 ntBASIC23.95■■□□□ 1.42
PDX1P52945 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDX1P52945 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.94■■□□□ 1.42
PDX1P52945 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PDX1P52945 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PDX1P52945 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.94■■□□□ 1.42
PDX1P52945 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDX1P52945 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDX1P52945 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDX1P52945 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDX1P52945 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDX1P52945 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDX1P52945 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PDX1P52945 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.92■■□□□ 1.42
PDX1P52945 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDX1P52945 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDX1P52945 DUX4L9-201ENST00000449051 1259 ntBASIC23.91■■□□□ 1.42
PDX1P52945 RP9P-202ENST00000450133 1212 ntBASIC23.91■■□□□ 1.42
PDX1P52945 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PDX1P52945 RAP2CP1-202ENST00000605179 643 ntBASIC23.91■■□□□ 1.42
PDX1P52945 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDX1P52945 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDX1P52945 SPCS2P3-201ENST00000500401 656 ntBASIC23.9■■□□□ 1.42
PDX1P52945 AC093536.1-201ENST00000569153 554 ntBASIC23.9■■□□□ 1.42
PDX1P52945 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms