Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 AC018358.1-201ENST00000631079 1402 ntBASIC20.9■□□□□ 0.94
ZNF728P0DKX0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF728P0DKX0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF728P0DKX0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF728P0DKX0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ZNF728P0DKX0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNF728P0DKX0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF728P0DKX0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 AC145676.1-201ENST00000514988 2004 ntBASIC20.85■□□□□ 0.93
ZNF728P0DKX0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZNF728P0DKX0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF728P0DKX0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.83■□□□□ 0.93
ZNF728P0DKX0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF728P0DKX0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF728P0DKX0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MIR3648-2-201ENST00000581792 180 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MIR3648-1-201ENST00000615959 180 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 CR559946.2-201ENST00000623684 991 ntBASIC20.82■□□□□ 0.92
ZNF728P0DKX0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF728P0DKX0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF728P0DKX0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF728P0DKX0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF728P0DKX0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ZNF728P0DKX0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF728P0DKX0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF728P0DKX0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC008813.1-201ENST00000536597 885 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC016575.1-201ENST00000607026 382 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 AC020928.2-201ENST00000588717 2197 ntBASIC20.76■□□□□ 0.91
ZNF728P0DKX0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF728P0DKX0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF728P0DKX0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms