Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TGFB1I1O43294 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TGFB1I1O43294 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.21■■□□□ 1.95
TGFB1I1O43294 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.21■■□□□ 1.95
TGFB1I1O43294 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.21■■□□□ 1.95
TGFB1I1O43294 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
TGFB1I1O43294 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TGFB1I1O43294 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TGFB1I1O43294 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TGFB1I1O43294 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TGFB1I1O43294 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TGFB1I1O43294 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.19■■□□□ 1.94
TGFB1I1O43294 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TGFB1I1O43294 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TGFB1I1O43294 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TGFB1I1O43294 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TGFB1I1O43294 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.17■■□□□ 1.94
TGFB1I1O43294 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TGFB1I1O43294 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.17■■□□□ 1.94
TGFB1I1O43294 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.17■■□□□ 1.94
TGFB1I1O43294 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TGFB1I1O43294 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TGFB1I1O43294 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TGFB1I1O43294 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.15■■□□□ 1.94
TGFB1I1O43294 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.15■■□□□ 1.94
TGFB1I1O43294 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
TGFB1I1O43294 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
TGFB1I1O43294 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TGFB1I1O43294 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.14■■□□□ 1.93
TGFB1I1O43294 AP004609.3-201ENST00000610705 1884 ntBASIC27.13■■□□□ 1.93
TGFB1I1O43294 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TGFB1I1O43294 MIR4449-201ENST00000578365 66 ntBASIC27.13■■□□□ 1.93
TGFB1I1O43294 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
TGFB1I1O43294 AL359258.2-201ENST00000564063 1566 ntBASIC27.13■■□□□ 1.93
TGFB1I1O43294 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TGFB1I1O43294 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.12■■□□□ 1.93
TGFB1I1O43294 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TGFB1I1O43294 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TGFB1I1O43294 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TGFB1I1O43294 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TGFB1I1O43294 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
TGFB1I1O43294 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TGFB1I1O43294 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
TGFB1I1O43294 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TGFB1I1O43294 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
TGFB1I1O43294 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.1■■□□□ 1.93
TGFB1I1O43294 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.1■■□□□ 1.93
TGFB1I1O43294 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TGFB1I1O43294 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.1■■□□□ 1.93
TGFB1I1O43294 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TGFB1I1O43294 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TGFB1I1O43294 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TGFB1I1O43294 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TGFB1I1O43294 AC142472.1-201ENST00000612013 1741 ntBASIC27.08■■□□□ 1.93
TGFB1I1O43294 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.08■■□□□ 1.93
TGFB1I1O43294 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TGFB1I1O43294 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.08■■□□□ 1.93
TGFB1I1O43294 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TGFB1I1O43294 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TGFB1I1O43294 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
TGFB1I1O43294 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.07■■□□□ 1.92
TGFB1I1O43294 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.07■■□□□ 1.92
TGFB1I1O43294 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TGFB1I1O43294 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.06■■□□□ 1.92
TGFB1I1O43294 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.06■■□□□ 1.92
TGFB1I1O43294 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TGFB1I1O43294 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.06■■□□□ 1.92
TGFB1I1O43294 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TGFB1I1O43294 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TGFB1I1O43294 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TGFB1I1O43294 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TGFB1I1O43294 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.05■■□□□ 1.92
TGFB1I1O43294 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TGFB1I1O43294 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
TGFB1I1O43294 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TGFB1I1O43294 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.04■■□□□ 1.92
TGFB1I1O43294 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TGFB1I1O43294 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TGFB1I1O43294 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TGFB1I1O43294 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TGFB1I1O43294 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TGFB1I1O43294 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TGFB1I1O43294 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TGFB1I1O43294 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
TGFB1I1O43294 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TGFB1I1O43294 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.01■■□□□ 1.91
TGFB1I1O43294 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TGFB1I1O43294 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TGFB1I1O43294 AC060814.1-201ENST00000554326 538 ntBASIC27■■□□□ 1.91
TGFB1I1O43294 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
TGFB1I1O43294 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27■■□□□ 1.91
TGFB1I1O43294 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms