Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.02■■□□□ 1.44
UBFD1O14562 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.02■■□□□ 1.44
UBFD1O14562 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.02■■□□□ 1.44
UBFD1O14562 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
UBFD1O14562 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
UBFD1O14562 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
UBFD1O14562 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.01■■□□□ 1.43
UBFD1O14562 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.01■■□□□ 1.43
UBFD1O14562 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBFD1O14562 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.01■■□□□ 1.43
UBFD1O14562 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBFD1O14562 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBFD1O14562 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
UBFD1O14562 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
UBFD1O14562 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24■■□□□ 1.43
UBFD1O14562 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24■■□□□ 1.43
UBFD1O14562 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
UBFD1O14562 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.99■■□□□ 1.43
UBFD1O14562 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBFD1O14562 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
UBFD1O14562 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.99■■□□□ 1.43
UBFD1O14562 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
UBFD1O14562 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
UBFD1O14562 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.99■■□□□ 1.43
UBFD1O14562 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
UBFD1O14562 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
UBFD1O14562 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
UBFD1O14562 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
UBFD1O14562 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
UBFD1O14562 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.97■■□□□ 1.43
UBFD1O14562 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.96■■□□□ 1.43
UBFD1O14562 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBFD1O14562 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
UBFD1O14562 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.96■■□□□ 1.43
UBFD1O14562 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBFD1O14562 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
UBFD1O14562 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
UBFD1O14562 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
UBFD1O14562 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
UBFD1O14562 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
UBFD1O14562 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBFD1O14562 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
UBFD1O14562 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.94■■□□□ 1.42
UBFD1O14562 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
UBFD1O14562 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
UBFD1O14562 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBFD1O14562 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBFD1O14562 RPS2P35-201ENST00000443417 897 ntBASIC23.93■■□□□ 1.42
UBFD1O14562 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
UBFD1O14562 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
UBFD1O14562 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
UBFD1O14562 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBFD1O14562 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
UBFD1O14562 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
UBFD1O14562 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBFD1O14562 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
UBFD1O14562 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
UBFD1O14562 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.91■■□□□ 1.42
UBFD1O14562 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.91■■□□□ 1.42
UBFD1O14562 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
UBFD1O14562 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.9■■□□□ 1.42
UBFD1O14562 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
UBFD1O14562 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
UBFD1O14562 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
UBFD1O14562 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.89■■□□□ 1.41
UBFD1O14562 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.89■■□□□ 1.41
UBFD1O14562 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
UBFD1O14562 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
UBFD1O14562 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBFD1O14562 LINC01971-201ENST00000617888 1048 ntBASIC23.88■■□□□ 1.41
UBFD1O14562 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBFD1O14562 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
UBFD1O14562 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.87■■□□□ 1.41
UBFD1O14562 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBFD1O14562 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBFD1O14562 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
UBFD1O14562 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBFD1O14562 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBFD1O14562 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.86■■□□□ 1.41
UBFD1O14562 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBFD1O14562 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBFD1O14562 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBFD1O14562 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.85■■□□□ 1.41
UBFD1O14562 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.85■■□□□ 1.41
UBFD1O14562 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
UBFD1O14562 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.85■■□□□ 1.41
UBFD1O14562 ERN1-208ENST00000606895 2068 ntBASIC23.85■■□□□ 1.41
UBFD1O14562 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBFD1O14562 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBFD1O14562 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBFD1O14562 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
UBFD1O14562 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
UBFD1O14562 DUX4L13-201ENST00000554103 1267 ntBASIC23.84■■□□□ 1.41
UBFD1O14562 DUX4L15-201ENST00000611059 1267 ntBASIC23.84■■□□□ 1.41
UBFD1O14562 DUX4L23-201ENST00000615195 1269 ntBASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms