Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 AL359258.2-201ENST00000564063 1566 ntBASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.82■□□□□ 0.92
TRAV38-1A0A0B4J264 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 AC022413.1-201ENST00000624602 984 ntBASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV38-1A0A0B4J264 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
TRAV38-1A0A0B4J264 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRAV38-1A0A0B4J264 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRAV38-1A0A0B4J264 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAV38-1A0A0B4J264 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAV38-1A0A0B4J264 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV38-1A0A0B4J264 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV38-1A0A0B4J264 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV38-1A0A0B4J264 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV38-1A0A0B4J264 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV38-1A0A0B4J264 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV38-1A0A0B4J264 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV38-1A0A0B4J264 GPX1-201ENST00000419349 1106 ntBASIC20.77■□□□□ 0.92
TRAV38-1A0A0B4J264 AC060814.1-201ENST00000554326 538 ntBASIC20.77■□□□□ 0.92
TRAV38-1A0A0B4J264 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV38-1A0A0B4J264 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV38-1A0A0B4J264 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAV38-1A0A0B4J264 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV38-1A0A0B4J264 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV38-1A0A0B4J264 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV38-1A0A0B4J264 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV38-1A0A0B4J264 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRAV38-1A0A0B4J264 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRAV38-1A0A0B4J264 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV38-1A0A0B4J264 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRAV38-1A0A0B4J264 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV38-1A0A0B4J264 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV38-1A0A0B4J264 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV38-1A0A0B4J264 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV38-1A0A0B4J264 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV38-1A0A0B4J264 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 AL449106.1-201ENST00000608517 1980 ntBASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV38-1A0A0B4J264 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV38-1A0A0B4J264 HSD17B1P1-201ENST00000590052 955 ntBASIC20.7■□□□□ 0.9
TRAV38-1A0A0B4J264 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV38-1A0A0B4J264 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV38-1A0A0B4J264 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 AC092296.2-201ENST00000589470 999 ntBASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV38-1A0A0B4J264 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV38-1A0A0B4J264 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV38-1A0A0B4J264 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV38-1A0A0B4J264 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV38-1A0A0B4J264 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV38-1A0A0B4J264 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 ECEL1P2-201ENST00000461596 1295 ntBASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 RNF126P1-201ENST00000567452 1320 ntBASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV38-1A0A0B4J264 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV38-1A0A0B4J264 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV38-1A0A0B4J264 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV38-1A0A0B4J264 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV38-1A0A0B4J264 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV38-1A0A0B4J264 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV38-1A0A0B4J264 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAV38-1A0A0B4J264 AL157400.5-201ENST00000507624 621 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms