Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.467e-6■□□□□ 10.7
SRSF1Q07955 ACY1-220ENST00000637149 386 ntTSL 312.17□□□□□ -0.467e-6■□□□□ 10.7
SRSF1Q07955 APRT-206ENST00000567057 437 ntTSL 212.09□□□□□ -0.477e-6■□□□□ 10.7
SRSF1Q07955 APRT-202ENST00000426324 664 ntTSL 2 BASIC12.02□□□□□ -0.497e-6■□□□□ 10.7
SRSF1Q07955 ACY1-208ENST00000490244 812 ntTSL 211.95□□□□□ -0.57e-6■□□□□ 10.7
SRSF1Q07955 RPUSD4-203ENST00000526942 1791 ntTSL 511.83□□□□□ -0.527e-6■□□□□ 10.7
SRSF1Q07955 ZNF789-210ENST00000488485 1884 ntTSL 211.74□□□□□ -0.532e-8■□□□□ 10.7
SRSF1Q07955 GALT-211ENST00000489643 2019 ntTSL 211.69□□□□□ -0.547e-6■□□□□ 10.7
SRSF1Q07955 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.547e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-227ENST00000637730 2735 ntTSL 511.5□□□□□ -0.577e-6■□□□□ 10.7
SRSF1Q07955 GALT-209ENST00000487381 1442 ntTSL 511.43□□□□□ -0.587e-6■□□□□ 10.7
SRSF1Q07955 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC11.42□□□□□ -0.587e-6■□□□□ 10.7
SRSF1Q07955 STK36-209ENST00000462031 582 ntTSL 211.28□□□□□ -0.62e-8■□□□□ 10.7
SRSF1Q07955 GALT-228ENST00000557706 1828 ntTSL 311.21□□□□□ -0.617e-6■□□□□ 10.7
SRSF1Q07955 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC11.06□□□□□ -0.647e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-228ENST00000637778 3628 ntTSL 511.03□□□□□ -0.647e-6■□□□□ 10.7
SRSF1Q07955 ABHD14A-ACY1-214ENST00000636490 3067 ntTSL 511□□□□□ -0.657e-6■□□□□ 10.7
SRSF1Q07955 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC10.84□□□□□ -0.672e-8■□□□□ 10.7
SRSF1Q07955 APRT-208ENST00000567713 470 ntTSL 510.82□□□□□ -0.687e-6■□□□□ 10.7
SRSF1Q07955 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)10.73□□□□□ -0.692e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-211ENST00000525502 546 ntTSL 410.72□□□□□ -0.692e-8■□□□□ 10.7
SRSF1Q07955 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.717e-6■□□□□ 10.7
SRSF1Q07955 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.712e-8■□□□□ 10.7
SRSF1Q07955 ACAA1-210ENST00000451419 964 ntTSL 310.55□□□□□ -0.722e-8■□□□□ 10.7
SRSF1Q07955 HNRNPH3-208ENST00000481819 2704 ntTSL 1 (best)10.55□□□□□ -0.722e-8■□□□□ 10.7
SRSF1Q07955 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC10.48□□□□□ -0.732e-8■□□□□ 10.7
SRSF1Q07955 GALT-207ENST00000473529 913 ntTSL 510.41□□□□□ -0.747e-6■□□□□ 10.7
SRSF1Q07955 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.747e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-227ENST00000533036 764 ntTSL 310.3□□□□□ -0.762e-8■□□□□ 10.7
SRSF1Q07955 STK36-203ENST00000414413 563 ntTSL 510.29□□□□□ -0.768e-11■□□□□ 10.7
SRSF1Q07955 GALT-216ENST00000554638 1712 ntTSL 510.28□□□□□ -0.767e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-226ENST00000532539 519 ntTSL 410.2□□□□□ -0.782e-8■□□□□ 10.7
SRSF1Q07955 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.787e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-209ENST00000524857 542 ntTSL 410.1□□□□□ -0.792e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC10.1□□□□□ -0.792e-8■□□□□ 10.7
SRSF1Q07955 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.87e-7■□□□□ 10.7
SRSF1Q07955 PSME2-208ENST00000559359 484 ntTSL 29.94□□□□□ -0.827e-6■□□□□ 10.7
SRSF1Q07955 GALT-205ENST00000472111 973 ntTSL 29.93□□□□□ -0.827e-6■□□□□ 10.7
SRSF1Q07955 GALT-226ENST00000556494 864 ntTSL 59.75□□□□□ -0.857e-6■□□□□ 10.7
SRSF1Q07955 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.862e-8■□□□□ 10.7
SRSF1Q07955 MYH9-204ENST00000459960 687 ntTSL 29.68□□□□□ -0.867e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-225ENST00000530643 575 ntTSL 39.61□□□□□ -0.872e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-202ENST00000330692 486 ntTSL 49.54□□□□□ -0.882e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-215ENST00000526601 2008 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.892e-8■□□□□ 10.7
SRSF1Q07955 NIF3L1-203ENST00000409129 813 ntTSL 59.49□□□□□ -0.897e-6■□□□□ 10.7
SRSF1Q07955 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC9.41□□□□□ -0.92e-8■□□□□ 10.7
SRSF1Q07955 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC9.41□□□□□ -0.97e-6■□□□□ 10.7
SRSF1Q07955 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC9.37□□□□□ -0.912e-7■□□□□ 10.7
SRSF1Q07955 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.917e-6■□□□□ 10.7
SRSF1Q07955 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.927e-6■□□□□ 10.7
SRSF1Q07955 PSME2-207ENST00000559056 512 ntTSL 59.28□□□□□ -0.927e-6■□□□□ 10.7
SRSF1Q07955 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.947e-6■□□□□ 10.7
SRSF1Q07955 LINC02365-201ENST00000519173 473 ntTSL 38.87□□□□□ -0.997e-6■□□□□ 10.7
SRSF1Q07955 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -17e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC8.77□□□□□ -1.012e-8■□□□□ 10.7
SRSF1Q07955 MERTK-204ENST00000439966 2972 ntTSL 1 (best)8.77□□□□□ -1.012e-7■□□□□ 10.7
SRSF1Q07955 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.012e-7■□□□□ 10.7
SRSF1Q07955 STK36-204ENST00000419433 2093 ntTSL 28.73□□□□□ -1.012e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-212ENST00000526501 610 ntTSL 48.66□□□□□ -1.022e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-216ENST00000527386 581 ntTSL 38.66□□□□□ -1.022e-8■□□□□ 10.7
SRSF1Q07955 RPUSD4-205ENST00000530903 1404 ntTSL 28.6□□□□□ -1.037e-6■□□□□ 10.7
SRSF1Q07955 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.047e-7■□□□□ 10.7
SRSF1Q07955 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.052e-7■□□□□ 10.7
SRSF1Q07955 ZNF195-222ENST00000529228 558 ntTSL 48.5□□□□□ -1.052e-8■□□□□ 10.7
SRSF1Q07955 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.067e-6■□□□□ 10.7
SRSF1Q07955 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.087e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC8.26□□□□□ -1.092e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-210ENST00000525313 720 ntTSL 58.26□□□□□ -1.092e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-221ENST00000529085 582 ntTSL 38.26□□□□□ -1.092e-8■□□□□ 10.7
SRSF1Q07955 RPUSD4-209ENST00000534393 579 ntTSL 48.23□□□□□ -1.097e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.12e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-205ENST00000399602 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.112e-8■□□□□ 10.7
SRSF1Q07955 PSME2-209ENST00000559453 1721 ntTSL 58.03□□□□□ -1.127e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-218ENST00000528410 1001 ntTSL 1 (best)8□□□□□ -1.132e-8■□□□□ 10.7
SRSF1Q07955 NIF3L1-209ENST00000454952 719 ntTSL 57.97□□□□□ -1.137e-6■□□□□ 10.7
SRSF1Q07955 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.147e-6■□□□□ 10.7
SRSF1Q07955 GALT-219ENST00000555020 2566 ntTSL 27.88□□□□□ -1.157e-6■□□□□ 10.7
SRSF1Q07955 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.152e-7■□□□□ 10.7
SRSF1Q07955 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.172e-8■□□□□ 10.7
SRSF1Q07955 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.187e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-223ENST00000529678 579 ntTSL 47.61□□□□□ -1.192e-8■□□□□ 10.7
SRSF1Q07955 ZNF789-205ENST00000465438 4253 ntTSL 1 (best)7.46□□□□□ -1.222e-8■□□□□ 10.7
SRSF1Q07955 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.45□□□□□ -1.227e-6■□□□□ 10.7
SRSF1Q07955 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.227e-6■□□□□ 10.7
SRSF1Q07955 SCML1-206ENST00000427362 846 ntTSL 57.38□□□□□ -1.237e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC7.3□□□□□ -1.242e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-217ENST00000528218 891 ntTSL 47.11□□□□□ -1.272e-8■□□□□ 10.7
SRSF1Q07955 RFWD3-205ENST00000572610 572 ntTSL 1 (best)7.04□□□□□ -1.282e-8■□□□□ 10.7
SRSF1Q07955 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.312e-8■□□□□ 10.7
SRSF1Q07955 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.327e-6■□□□□ 10.7
SRSF1Q07955 NIF3L1-207ENST00000426253 749 ntTSL 56.69□□□□□ -1.347e-6■□□□□ 10.7
SRSF1Q07955 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.382e-8■□□□□ 10.7
SRSF1Q07955 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.417e-6■□□□□ 10.7
SRSF1Q07955 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.477e-6■□□□□ 10.7
SRSF1Q07955 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.487e-6■□□□□ 10.7
SRSF1Q07955 ROCK2-206ENST00000462366 563 ntTSL 35.57□□□□□ -1.527e-6■□□□□ 10.7
SRSF1Q07955 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.572e-8■□□□□ 10.7
SRSF1Q07955 RPUSD4-204ENST00000530036 566 ntTSL 35.21□□□□□ -1.587e-6■□□□□ 10.7
SRSF1Q07955 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.81□□□□□ -1.647e-6■□□□□ 10.7
SRSF1Q07955 RFWD3-210ENST00000575281 494 ntTSL 44.51□□□□□ -1.692e-8■□□□□ 10.7
Retrieved 100 of 14,836 protein–RNA pairs in 225.8 ms